Record Information |
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Version | 5.0 |
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Status | Predicted |
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Creation Date | 2021-09-19 05:56:45 UTC |
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Update Date | 2022-11-30 20:10:11 UTC |
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HMDB ID | HMDB0297039 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | DG(2:0/PGE1/0:0) |
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Description | DG(2:0/PGE1/0:0) belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid. Based on a literature review very few articles have been published on DG(2:0/PGE1/0:0). |
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Structure | CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(=O)O[C@@H](CO)COC(C)=O InChI=1S/C25H42O8/c1-3-4-7-10-19(28)13-14-22-21(23(29)15-24(22)30)11-8-5-6-9-12-25(31)33-20(16-26)17-32-18(2)27/h13-14,19-22,24,26,28,30H,3-12,15-17H2,1-2H3/b14-13+/t19-,20-,21+,22+,24+/m0/s1 |
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Synonyms | Value | Source |
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(2S)-1-(Acetyloxy)-3-hydroxypropan-2-yl 7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoic acid | HMDB |
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Chemical Formula | C25H42O8 |
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Average Molecular Weight | 470.603 |
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Monoisotopic Molecular Weight | 470.287968312 |
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IUPAC Name | (2S)-1-(acetyloxy)-3-hydroxypropan-2-yl 7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoate |
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Traditional Name | (2S)-1-(acetyloxy)-3-hydroxypropan-2-yl 7-[(1R,2R,3R)-3-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-5-oxocyclopentyl]heptanoate |
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CAS Registry Number | Not Available |
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SMILES | CCCCC[C@H](O)\C=C\[C@H]1[C@H](O)CC(=O)[C@@H]1CCCCCCC(=O)O[C@@H](CO)COC(C)=O |
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InChI Identifier | InChI=1S/C25H42O8/c1-3-4-7-10-19(28)13-14-22-21(23(29)15-24(22)30)11-8-5-6-9-12-25(31)33-20(16-26)17-32-18(2)27/h13-14,19-22,24,26,28,30H,3-12,15-17H2,1-2H3/b14-13+/t19-,20-,21+,22+,24+/m0/s1 |
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InChI Key | YNDZOPCXCVFIES-KCLXVOGESA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Fatty Acyls |
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Sub Class | Eicosanoids |
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Direct Parent | Prostaglandins and related compounds |
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Alternative Parents | |
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Substituents | - Prostaglandin skeleton
- Diradylglycerol
- Diacylglycerol
- 1,2-acyl-sn-glycerol
- Fatty alcohol
- Glycerolipid
- Fatty acid ester
- Dicarboxylic acid or derivatives
- Cyclopentanol
- Cyclic alcohol
- Cyclic ketone
- Secondary alcohol
- Ketone
- Carboxylic acid ester
- Carboxylic acid derivative
- Organic oxygen compound
- Organic oxide
- Hydrocarbon derivative
- Primary alcohol
- Organooxygen compound
- Carbonyl group
- Alcohol
- Aliphatic homomonocyclic compound
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Molecular Framework | Aliphatic homomonocyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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DG(2:0/PGE1/0:0),4TMS,isomer #1 | CCCCC[C@@H](/C=C/[C@@H]1C(CCCCCCC(=O)O[C@H](COC(C)=O)CO[Si](C)(C)C)=C(O[Si](C)(C)C)C[C@H]1O[Si](C)(C)C)O[Si](C)(C)C | 3356.5 | Semi standard non polar | 33892256 | DG(2:0/PGE1/0:0),4TMS,isomer #1 | CCCCC[C@@H](/C=C/[C@@H]1C(CCCCCCC(=O)O[C@H](COC(C)=O)CO[Si](C)(C)C)=C(O[Si](C)(C)C)C[C@H]1O[Si](C)(C)C)O[Si](C)(C)C | 3264.7 | Standard non polar | 33892256 | DG(2:0/PGE1/0:0),4TMS,isomer #1 | CCCCC[C@@H](/C=C/[C@@H]1C(CCCCCCC(=O)O[C@H](COC(C)=O)CO[Si](C)(C)C)=C(O[Si](C)(C)C)C[C@H]1O[Si](C)(C)C)O[Si](C)(C)C | 3761.7 | Standard polar | 33892256 | DG(2:0/PGE1/0:0),4TMS,isomer #2 | CCCCC[C@@H](/C=C/[C@H]1[C@H](O[Si](C)(C)C)C=C(O[Si](C)(C)C)[C@@H]1CCCCCCC(=O)O[C@H](COC(C)=O)CO[Si](C)(C)C)O[Si](C)(C)C | 3365.8 | Semi standard non polar | 33892256 | DG(2:0/PGE1/0:0),4TMS,isomer #2 | CCCCC[C@@H](/C=C/[C@H]1[C@H](O[Si](C)(C)C)C=C(O[Si](C)(C)C)[C@@H]1CCCCCCC(=O)O[C@H](COC(C)=O)CO[Si](C)(C)C)O[Si](C)(C)C | 3044.2 | Standard non polar | 33892256 | DG(2:0/PGE1/0:0),4TMS,isomer #2 | CCCCC[C@@H](/C=C/[C@H]1[C@H](O[Si](C)(C)C)C=C(O[Si](C)(C)C)[C@@H]1CCCCCCC(=O)O[C@H](COC(C)=O)CO[Si](C)(C)C)O[Si](C)(C)C | 3855.3 | Standard polar | 33892256 |
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