Record Information |
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Version | 5.0 |
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Status | Predicted |
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Creation Date | 2021-09-18 03:55:18 UTC |
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Update Date | 2022-11-30 20:09:12 UTC |
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HMDB ID | HMDB0294802 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | DG(PGD1/12:0/0:0) |
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Description | DG(PGD1/12:0/0:0) belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid. Based on a literature review very few articles have been published on DG(PGD1/12:0/0:0). |
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Structure | CCCCCCCCCCCC(=O)O[C@@H](CO)COC(=O)CCCCCC[C@H]1[C@@H](O)CC(=O)[C@@H]1\C=C\[C@@H](O)CCCCC InChI=1S/C35H62O8/c1-3-5-7-8-9-10-11-12-18-22-35(41)43-29(26-36)27-42-34(40)21-17-14-13-16-20-30-31(33(39)25-32(30)38)24-23-28(37)19-15-6-4-2/h23-24,28-32,36-38H,3-22,25-27H2,1-2H3/b24-23+/t28-,29-,30+,31+,32-/m0/s1 |
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Synonyms | Value | Source |
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(2S)-1-Hydroxy-3-({7-[(1R,2R,5S)-5-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-3-oxocyclopentyl]heptanoyl}oxy)propan-2-yl dodecanoic acid | HMDB |
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Chemical Formula | C35H62O8 |
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Average Molecular Weight | 610.873 |
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Monoisotopic Molecular Weight | 610.444468956 |
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IUPAC Name | (2S)-1-hydroxy-3-({7-[(1R,2R,5S)-5-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-3-oxocyclopentyl]heptanoyl}oxy)propan-2-yl dodecanoate |
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Traditional Name | (2S)-1-hydroxy-3-({7-[(1R,2R,5S)-5-hydroxy-2-[(1E,3S)-3-hydroxyoct-1-en-1-yl]-3-oxocyclopentyl]heptanoyl}oxy)propan-2-yl dodecanoate |
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CAS Registry Number | Not Available |
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SMILES | CCCCCCCCCCCC(=O)O[C@@H](CO)COC(=O)CCCCCC[C@H]1[C@@H](O)CC(=O)[C@@H]1\C=C\[C@@H](O)CCCCC |
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InChI Identifier | InChI=1S/C35H62O8/c1-3-5-7-8-9-10-11-12-18-22-35(41)43-29(26-36)27-42-34(40)21-17-14-13-16-20-30-31(33(39)25-32(30)38)24-23-28(37)19-15-6-4-2/h23-24,28-32,36-38H,3-22,25-27H2,1-2H3/b24-23+/t28-,29-,30+,31+,32-/m0/s1 |
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InChI Key | OUFYRTPLQLCEJG-JVLZVHPSSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as prostaglandins and related compounds. These are unsaturated carboxylic acids consisting of a 20 carbon skeleton that also contains a five member ring, and are based upon the fatty acid arachidonic acid. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Fatty Acyls |
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Sub Class | Eicosanoids |
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Direct Parent | Prostaglandins and related compounds |
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Alternative Parents | |
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Substituents | - Prostaglandin skeleton
- Diradylglycerol
- Diacylglycerol
- 1,2-acyl-sn-glycerol
- Fatty alcohol
- Glycerolipid
- Fatty acid ester
- Dicarboxylic acid or derivatives
- Cyclopentanol
- Cyclic alcohol
- Cyclic ketone
- Secondary alcohol
- Ketone
- Carboxylic acid ester
- Carboxylic acid derivative
- Organic oxygen compound
- Organic oxide
- Hydrocarbon derivative
- Primary alcohol
- Organooxygen compound
- Carbonyl group
- Alcohol
- Aliphatic homomonocyclic compound
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Molecular Framework | Aliphatic homomonocyclic compounds |
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External Descriptors | Not Available |
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Ontology |
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Physiological effect | Not Available |
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Disposition | |
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Process | Not Available |
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Role | Not Available |
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Physical Properties |
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State | Not Available |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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DG(PGD1/12:0/0:0),4TMS,isomer #1 | CCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCC[C@@H]1C(/C=C/[C@H](CCCCC)O[Si](C)(C)C)=C(O[Si](C)(C)C)C[C@@H]1O[Si](C)(C)C)CO[Si](C)(C)C | 4415.2 | Semi standard non polar | 33892256 | DG(PGD1/12:0/0:0),4TMS,isomer #1 | CCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCC[C@@H]1C(/C=C/[C@H](CCCCC)O[Si](C)(C)C)=C(O[Si](C)(C)C)C[C@@H]1O[Si](C)(C)C)CO[Si](C)(C)C | 3742.1 | Standard non polar | 33892256 | DG(PGD1/12:0/0:0),4TMS,isomer #1 | CCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCC[C@@H]1C(/C=C/[C@H](CCCCC)O[Si](C)(C)C)=C(O[Si](C)(C)C)C[C@@H]1O[Si](C)(C)C)CO[Si](C)(C)C | 4725.0 | Standard polar | 33892256 | DG(PGD1/12:0/0:0),4TMS,isomer #2 | CCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCC[C@H]1[C@@H](O[Si](C)(C)C)C=C(O[Si](C)(C)C)[C@@H]1/C=C/[C@H](CCCCC)O[Si](C)(C)C)CO[Si](C)(C)C | 4326.6 | Semi standard non polar | 33892256 | DG(PGD1/12:0/0:0),4TMS,isomer #2 | CCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCC[C@H]1[C@@H](O[Si](C)(C)C)C=C(O[Si](C)(C)C)[C@@H]1/C=C/[C@H](CCCCC)O[Si](C)(C)C)CO[Si](C)(C)C | 3583.4 | Standard non polar | 33892256 | DG(PGD1/12:0/0:0),4TMS,isomer #2 | CCCCCCCCCCCC(=O)O[C@H](COC(=O)CCCCCC[C@H]1[C@@H](O[Si](C)(C)C)C=C(O[Si](C)(C)C)[C@@H]1/C=C/[C@H](CCCCC)O[Si](C)(C)C)CO[Si](C)(C)C | 4766.0 | Standard polar | 33892256 |
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