Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 03:52:49 UTC |
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Update Date | 2022-11-30 19:26:06 UTC |
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HMDB ID | HMDB0115199 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) |
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Description | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)), in particular, consists of one chain of eicosapentaenoic acid at the C-1 position and one chain of myristoleic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)(COP(O)(O)=O)OC(=O)CCCCCCC\C=C/CCCC InChI=1S/C37H61O8P/c1-3-5-7-9-11-13-15-16-17-18-19-20-22-23-25-27-29-31-36(38)43-33-35(34-44-46(40,41)42)45-37(39)32-30-28-26-24-21-14-12-10-8-6-4-2/h5,7,10-13,16-17,19-20,23,25,35H,3-4,6,8-9,14-15,18,21-22,24,26-34H2,1-2H3,(H2,40,41,42)/b7-5-,12-10-,13-11-,17-16-,20-19-,25-23-/t35-/m1/s1 |
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Synonyms | Value | Source |
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1-eicosapentaenoyl-2-myristoleoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-eicosapentaenoyl-2-myristoleoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(20:5/14:1) | SMPDB, HMDB | PA(20:5n3/14:1n5) | SMPDB, HMDB | PA(20:5w3/14:1w5) | SMPDB, HMDB | PA(34:6) | SMPDB, HMDB | Phosphatidic acid(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) | SMPDB, HMDB | Phosphatidic acid(20:5/14:1) | SMPDB, HMDB | Phosphatidic acid(20:5n3/14:1n5) | SMPDB, HMDB | Phosphatidic acid(20:5w3/14:1w5) | SMPDB, HMDB | Phosphatidic acid(34:6) | SMPDB, HMDB | Phosphatidate(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) | SMPDB, HMDB | Phosphatidate(20:5/14:1) | SMPDB, HMDB | Phosphatidate(20:5n3/14:1n5) | SMPDB, HMDB | Phosphatidate(20:5w3/14:1w5) | SMPDB, HMDB | Phosphatidate(34:6) | SMPDB, HMDB | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) | SMPDB |
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Chemical Formula | C37H61O8P |
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Average Molecular Weight | 664.861 |
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Monoisotopic Molecular Weight | 664.410405922 |
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IUPAC Name | [(2R)-3-[(5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoyloxy]-2-[(9Z)-tetradec-9-enoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-3-[(5Z,8Z,11Z,14Z,17Z)-icosa-5,8,11,14,17-pentaenoyloxy]-2-[(9Z)-tetradec-9-enoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)(COP(O)(O)=O)OC(=O)CCCCCCC\C=C/CCCC |
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InChI Identifier | InChI=1S/C37H61O8P/c1-3-5-7-9-11-13-15-16-17-18-19-20-22-23-25-27-29-31-36(38)43-33-35(34-44-46(40,41)42)45-37(39)32-30-28-26-24-21-14-12-10-8-6-4-2/h5,7,10-13,16-17,19-20,23,25,35H,3-4,6,8-9,14-15,18,21-22,24,26-34H2,1-2H3,(H2,40,41,42)/b7-5-,12-10-,13-11-,17-16-,20-19-,25-23-/t35-/m1/s1 |
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InChI Key | GYUFJFOEGVOZKR-FTHZEDMHSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- De Novo Triacylglycerol Biosynthesis TG(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0026032)
- De Novo Triacylglycerol Biosynthesis TG(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0026033)
- De Novo Triacylglycerol Biosynthesis TG(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0026034)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedMetabolite | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)(COP(O)(O)=O)OC(=O)CCCCCCC\C=C/CCCC | 5102.9 | Standard polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)(COP(O)(O)=O)OC(=O)CCCCCCC\C=C/CCCC | 4051.7 | Standard non polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) | [H][C@@](COC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/C\C=C/CC)(COP(O)(O)=O)OC(=O)CCCCCCC\C=C/CCCC | 4724.7 | Semi standard non polar | 33892256 |
DerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),1TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 4748.7 | Semi standard non polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),1TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 4203.4 | Standard non polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),1TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 5052.8 | Standard polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),2TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 4719.5 | Semi standard non polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),2TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 4181.5 | Standard non polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),2TMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 4368.9 | Standard polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),1TBDMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 4963.0 | Semi standard non polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),1TBDMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 4331.0 | Standard non polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),1TBDMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 5054.0 | Standard polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),2TBDMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 5140.7 | Semi standard non polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),2TBDMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 4355.4 | Standard non polar | 33892256 | PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)),2TBDMS,isomer #1 | CC/C=C\C/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)OC[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)OC(=O)CCCCCCC/C=C\CCCC | 4478.5 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 10V, Positive-QTOF | splash10-05n0-1294325000-6c995778052ab128e003 | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 20V, Positive-QTOF | splash10-052v-2493231000-69d7b4787783cd2125b4 | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 40V, Positive-QTOF | splash10-0aou-1597031000-b4ea19c8ed5122beefbb | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 10V, Negative-QTOF | splash10-0fc0-5096303000-7200d187ce5887a3b11c | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 20V, Negative-QTOF | splash10-004i-9033000000-16203a83d893e86a1981 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 40V, Negative-QTOF | splash10-004i-9000000000-5383513bea42f614e60b | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 10V, Positive-QTOF | splash10-000i-0000009000-0870434578a7b832549f | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 20V, Positive-QTOF | splash10-000i-0000099000-1ae0812c3caf93151d5a | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 40V, Positive-QTOF | splash10-000i-0003934000-7ce31c2e1fb4080ad2ea | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 10V, Positive-QTOF | splash10-00kb-0000009000-f945d2024f08a58359ef | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 20V, Positive-QTOF | splash10-014i-0000059000-988435c3e5908e375cbb | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 40V, Positive-QTOF | splash10-02ti-0006693000-b309f8a1167a32679154 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 10V, Negative-QTOF | splash10-03di-0000009000-b9be9fdded345f7d4893 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 20V, Negative-QTOF | splash10-0imr-1139605000-0b8a9243b6cdd24d4e50 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(20:5(5Z,8Z,11Z,14Z,17Z)/14:1(9Z)) 40V, Negative-QTOF | splash10-0ufr-1149201000-12a0708cd5fcc8c47f40 | 2021-09-24 | Wishart Lab | View Spectrum |
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