Record Information |
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Version | 5.0 |
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Status | Expected but not Quantified |
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Creation Date | 2017-09-09 03:16:53 UTC |
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Update Date | 2022-11-30 19:26:00 UTC |
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HMDB ID | HMDB0114988 |
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Secondary Accession Numbers | None |
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Metabolite Identification |
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Common Name | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) |
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Description | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) is a phosphatidic acid. It is a glycerophospholipid in which a phosphate moiety occupies a glycerol substitution site. As is the case with diacylglycerols, phosphatidic acids can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)), in particular, consists of one chain of gamma-linolenic acid at the C-1 position and one chain of arachidonic acid at the C-2 position. Phosphatidic acids are quite rare but are extremely important as intermediates in the biosynthesis of triacylglycerols and phospholipids. |
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Structure | [H][C@@](COC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC InChI=1S/C41H67O8P/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-36-41(43)49-39(38-48-50(44,45)46)37-47-40(42)35-33-31-29-27-25-23-21-18-16-14-12-10-8-6-4-2/h11-14,17-19,21-22,24-25,27-28,30,39H,3-10,15-16,20,23,26,29,31-38H2,1-2H3,(H2,44,45,46)/b13-11-,14-12-,19-17-,21-18-,24-22-,27-25-,30-28-/t39-/m1/s1 |
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Synonyms | Value | Source |
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1-gamma-linolenoyl-2-arachidonoyl-sn-glycero-3-phosphate | SMPDB, HMDB | 1-gamma-linolenoyl-2-arachidonoyl-sn-phosphatidic acid | SMPDB, HMDB | PA(18:3/20:4) | SMPDB, HMDB | PA(18:3n6/20:4n6) | SMPDB, HMDB | PA(18:3w6/20:4w6) | SMPDB, HMDB | PA(38:7) | SMPDB, HMDB | Phosphatidic acid(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) | SMPDB, HMDB | Phosphatidic acid(18:3/20:4) | SMPDB, HMDB | Phosphatidic acid(18:3n6/20:4n6) | SMPDB, HMDB | Phosphatidic acid(18:3w6/20:4w6) | SMPDB, HMDB | Phosphatidic acid(38:7) | SMPDB, HMDB | Phosphatidate(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) | SMPDB, HMDB | Phosphatidate(18:3/20:4) | SMPDB, HMDB | Phosphatidate(18:3n6/20:4n6) | SMPDB, HMDB | Phosphatidate(18:3w6/20:4w6) | SMPDB, HMDB | Phosphatidate(38:7) | SMPDB, HMDB | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) | SMPDB |
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Chemical Formula | C41H67O8P |
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Average Molecular Weight | 718.953 |
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Monoisotopic Molecular Weight | 718.457356115 |
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IUPAC Name | [(2R)-2-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-3-[(6Z,9Z,12Z)-octadeca-6,9,12-trienoyloxy]propoxy]phosphonic acid |
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Traditional Name | (2R)-2-[(5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoyloxy]-3-[(6Z,9Z,12Z)-octadeca-6,9,12-trienoyloxy]propoxyphosphonic acid |
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CAS Registry Number | Not Available |
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SMILES | [H][C@@](COC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC |
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InChI Identifier | InChI=1S/C41H67O8P/c1-3-5-7-9-11-13-15-17-19-20-22-24-26-28-30-32-34-36-41(43)49-39(38-48-50(44,45)46)37-47-40(42)35-33-31-29-27-25-23-21-18-16-14-12-10-8-6-4-2/h11-14,17-19,21-22,24-25,27-28,30,39H,3-10,15-16,20,23,26,29,31-38H2,1-2H3,(H2,44,45,46)/b13-11-,14-12-,19-17-,21-18-,24-22-,27-25-,30-28-/t39-/m1/s1 |
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InChI Key | MHFQXBRICBDGII-ZRIAIQHZSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as 1,2-diacylglycerol-3-phosphates. These are glycerol-3-phosphates in which the glycerol moiety is bonded to two aliphatic chains through ester linkages. |
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Kingdom | Organic compounds |
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Super Class | Lipids and lipid-like molecules |
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Class | Glycerophospholipids |
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Sub Class | Glycerophosphates |
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Direct Parent | 1,2-diacylglycerol-3-phosphates |
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Alternative Parents | |
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Substituents | - 1,2-diacylglycerol-3-phosphate
- Fatty acid ester
- Monoalkyl phosphate
- Dicarboxylic acid or derivatives
- Fatty acyl
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Carboxylic acid ester
- Carboxylic acid derivative
- Hydrocarbon derivative
- Organic oxide
- Organic oxygen compound
- Carbonyl group
- Organooxygen compound
- Aliphatic acyclic compound
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Molecular Framework | Aliphatic acyclic compounds |
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External Descriptors | |
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Ontology |
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Physiological effect | Not Available |
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Disposition | Not Available |
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Process | Naturally occurring processBiological processBiochemical pathwayMetabolic pathway- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/18:3(6Z,9Z,12Z)) (PathBank: SMP0024611)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0024612)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/22:2(13Z,16Z)) (PathBank: SMP0024613)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/22:4(7Z,10Z,13Z,16Z)) (PathBank: SMP0024614)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/22:5(4Z,7Z,10Z,13Z,16Z)) (PathBank: SMP0024615)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/18:3(9Z,12Z,15Z)) (PathBank: SMP0024616)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/18:4(6Z,9Z,12Z,15Z)) (PathBank: SMP0024617)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0024618)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0024619)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/22:5(7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0024620)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (PathBank: SMP0024621)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:2(11Z,14Z)) (PathBank: SMP0033355)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:3(8Z,11Z,14Z)) (PathBank: SMP0033356)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/22:0) (PathBank: SMP0066996)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/22:1(13Z)) (PathBank: SMP0066997)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/24:0) (PathBank: SMP0067003)
- De Novo Triacylglycerol Biosynthesis TG(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/24:1(15Z)) (PathBank: SMP0067004)
- Cardiolipin Biosynthesis CL(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)) (PathBank: SMP0086500)
- Cardiolipin Biosynthesis CL(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0086501)
- Cardiolipin Biosynthesis CL(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:4(5Z,8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0086502)
- Cardiolipin Biosynthesis CL(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)/20:4(8Z,11Z,14Z,17Z)) (PathBank: SMP0086503)
- Cardiolipin Biosynthesis CL(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:4(8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0086504)
- Cardiolipin Biosynthesis CL(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)/20:5(5Z,8Z,11Z,14Z,17Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (PathBank: SMP0086505)
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Role | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Not Available |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedMetabolite | SMILES | Kovats RI Value | Column Type | Reference |
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PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) | [H][C@@](COC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC | 5446.6 | Standard polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) | [H][C@@](COC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC | 4399.8 | Standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) | [H][C@@](COC(=O)CCCC\C=C/C\C=C/C\C=C/CCCCC)(COP(O)(O)=O)OC(=O)CCC\C=C/C\C=C/C\C=C/C\C=C/CCCCC | 5124.3 | Semi standard non polar | 33892256 |
DerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)O[C@H](COC(=O)CCCC/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C | 5153.4 | Semi standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)O[C@H](COC(=O)CCCC/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C | 4548.4 | Standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)),1TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)O[C@H](COC(=O)CCCC/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C | 5141.9 | Standard polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)O[C@H](COC(=O)CCCC/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 5118.7 | Semi standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)O[C@H](COC(=O)CCCC/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 4517.3 | Standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)),2TMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)O[C@H](COC(=O)CCCC/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C | 4519.7 | Standard polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)O[C@H](COC(=O)CCCC/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5366.5 | Semi standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)O[C@H](COC(=O)CCCC/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 4671.3 | Standard non polar | 33892256 | PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)),1TBDMS,isomer #1 | CCCCC/C=C\C/C=C\C/C=C\C/C=C\CCCC(=O)O[C@H](COC(=O)CCCC/C=C\C/C=C\C/C=C\CCCCC)COP(=O)(O)O[Si](C)(C)C(C)(C)C | 5163.6 | Standard polar | 33892256 |
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| MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 10V, Positive-QTOF | splash10-014r-1092502400-5dbac9aa17c64f63dd8a | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 20V, Positive-QTOF | splash10-029e-2192221000-85cd940efaef7ceb21f3 | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 40V, Positive-QTOF | splash10-00kr-1094013000-48270e2995e80c7b9690 | 2019-02-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 10V, Negative-QTOF | splash10-056r-4092300200-9f4988ea4970a6d9ef68 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 20V, Negative-QTOF | splash10-004i-9050000000-c2cacc9ded86a9961e6b | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 40V, Negative-QTOF | splash10-004i-9000000000-91f267ba0e23c5e17973 | 2019-02-23 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 10V, Positive-QTOF | splash10-0006-0000000900-aa6ba0a33f526a1c0f43 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 20V, Positive-QTOF | splash10-0006-0000009900-a571a15e5c48ac9aaf97 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 40V, Positive-QTOF | splash10-01p6-0000902300-4e554e5d7997f86ffc4f | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 10V, Negative-QTOF | splash10-014i-0000000900-10a909c9bbc7af0d3359 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 20V, Negative-QTOF | splash10-0jr9-0033900400-12b0b80a116c07a60ef0 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 40V, Negative-QTOF | splash10-0fb9-1196600100-84794859e93427a81f51 | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 10V, Positive-QTOF | splash10-0uxr-0000000900-301f2f4f3daff768520a | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 20V, Positive-QTOF | splash10-01b9-0000005900-214905a91e4b8e0d040e | 2021-09-24 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - PA(18:3(6Z,9Z,12Z)/20:4(5Z,8Z,11Z,14Z)) 40V, Positive-QTOF | splash10-00xu-0000906200-caa5a71c1b569dc8b3f1 | 2021-09-24 | Wishart Lab | View Spectrum |
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