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Identification Taxonomy Ontology Physical properties Spectra Biological properties Concentrations Links References enzymes (71)transporters (1) Show 72 proteins XML

enzymes (71)transporters (1) Show 72 proteins

Record Information

Version

5.0

Status

Detected and Quantified

Creation Date

2008-12-10 02:07:11 UTC

Update Date

2022-03-07 02:51:06 UTC

HMDB ID

HMDB0011301

Secondary Accession Numbers

HMDB11301

Metabolite Identification

Common Name

PC(P-18:1(11Z)/P-18:1(9Z))

Description

PC(P-18:1(11Z)/P-18:1(9Z)) is a phosphatidylcholine (PC or GPCho). It is a glycerophospholipid in which a phosphorylcholine moiety occupies a glycerol substitution site. As is the case with diacylglycerols, glycerophosphocholines can have many different combinations of fatty acids of varying lengths and saturation attached at the C-1 and C-2 positions. Fatty acids containing 16, 18 and 20 carbons are the most common. PC(P-18:1(11Z)/P-18:1(9Z)), in particular, consists of one chain of plasmalogen 18:1n7 at the C-1 position and one chain of plasmalogen 18:1n9 at the C-2 position. The plasmalogen 18:1n7 moiety is derived from animal fats, liver and kidney, while the plasmalogen 18:1n9 moiety is derived from animal fats, liver and kidney. Phospholipids, are ubiquitous in nature and are key components of the lipid bilayer of cells, as well as being involved in metabolism and signaling.

Structure

MOL 3D MOL SDF 3D SDF PDB 3D PDB SMILES InChI

PC(P-18:1(11Z)/P-18:1(9Z))
  Mrv1652304052008242D          

 53 52  0  0  1  0            999 V2000
   17.2908  -10.1901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.5855  -10.5973    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   15.8804  -10.1901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9959  -10.5973    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.1752  -10.5973    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.5855  -11.4116    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.7012  -10.1901    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   19.1084  -10.8954    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
   18.2941   -9.4849    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.4063   -9.7829    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.1115  -10.1901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.8167   -9.7829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.5219  -10.1901    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
   21.1147  -10.8954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.1746   -9.3375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.2272  -10.5973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.3747  -11.1477    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.4607  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6357  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9215  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2074  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4932  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7791  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0649  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3508  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6367  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9226  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2084  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3834  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6692  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9551  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2410  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5268  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8127  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0986  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.8711  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0461  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3319  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6178  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9036  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1895  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4754  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7613  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0471  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2221  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5079  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.7938  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.0796  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3655  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6514  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9373  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2231  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5090  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  4  1  0  0  0  0
  2  1  1  0  0  0  0
  2  6  1  0  0  0  0
  2 17  1  1  0  0  0
  3  2  1  0  0  0  0
  3  5  1  0  0  0  0
  4  7  1  0  0  0  0
  5 18  1  0  0  0  0
  6 36  1  0  0  0  0
  7  8  1  0  0  0  0
  7  9  2  0  0  0  0
  7 10  1  0  0  0  0
 10 11  1  0  0  0  0
 11 12  1  0  0  0  0
 12 13  1  0  0  0  0
 13 14  1  0  0  0  0
 13 15  1  0  0  0  0
 13 16  1  0  0  0  0
 18 19  2  0  0  0  0
 19 20  1  0  0  0  0
 20 21  1  0  0  0  0
 21 22  1  0  0  0  0
 22 23  1  0  0  0  0
 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 36 37  2  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  2  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
M  CHG  2   8  -1  13   1
M  END

HMDB0011301
     RDKit          3D
PC(P-18:1(11Z)/P-18:1(9Z))
136135  0  0  0  0  0  0  0  0999 V2000
    5.0572    0.1384    5.4161 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9986    0.3144    6.9307 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3130   -0.9377    7.4653 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9265   -0.9662    6.8181 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2102   -2.1952    7.2996 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8174   -2.1825    6.6333 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0386   -2.1866    5.1996 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6101   -1.2327    4.4127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1253   -0.0835    4.9004 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4998    1.2607    4.6568 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7030    1.6074    3.2235 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5799    1.6364    2.4284 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2624    2.0482    0.9986 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5116    2.0625    0.1551 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1113    2.5154   -1.2509 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3124    2.5033   -2.1609 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0220    2.9505   -3.5183 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0889    2.0462   -4.5064 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4142    0.7658   -4.2067 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9886   -0.2055   -5.0194 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1270   -1.5314   -4.2773 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0972   -1.3680   -3.1533 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3026   -0.8920   -3.6973 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4364   -0.6947   -2.4720 P   0  0  0  0  0  5  0  0  0  0  0  0
   -7.6086   -1.5883   -2.7762 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9186    0.9098   -2.4586 O   0  0  0  0  0  1  0  0  0  0  0  0
   -5.8160   -1.1685   -0.9664 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7422   -0.8722    0.0340 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2465   -1.2740    1.3981 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0286   -0.6292    1.7948 N   0  0  0  0  0  4  0  0  0  0  0  0
   -3.9057   -1.5140    1.6232 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7946    0.6144    1.0983 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1662   -0.2835    3.2193 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8650   -2.0149   -3.8652 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0271   -1.3167   -3.0229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5370   -1.9293   -1.9194 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9026   -3.3122   -1.6431 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1658   -4.3324   -1.6268 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2448   -4.2346   -0.6561 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2253   -3.1680   -0.5579 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1930   -2.8836   -1.6219 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.7490   -2.4693   -2.9744 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.9381   -2.2549   -3.8808 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2050   -1.1256   -4.4303 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.3661    0.1080   -4.2330 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8179    0.5914   -5.5261 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.9108    1.7357   -5.5736 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2879    3.0694   -5.0837 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.5515    3.2705   -3.6354 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9112    4.7564   -3.3674 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.1604    4.9064   -1.8970 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2979    4.0212   -1.4374 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.1986    0.6312    4.9296 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0686   -0.9576    5.1781 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0428    0.5100    5.0919 H   0  0  0  0  0  0  0  0  0  0  0  0
    6.0017    0.4125    7.3702 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.3232    1.1558    7.2183 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1921   -0.8861    8.5611 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9050   -1.8068    7.1734 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.0144   -1.0065    5.7139 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3400   -0.0806    7.1524 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.1204   -2.2453    8.3931 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.7653   -3.0968    6.9741 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1989   -1.4301    7.0854 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4094   -3.2102    6.9141 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.6000   -3.0599    4.8012 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.8107   -1.2917    3.3201 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5169   -0.1110    5.9217 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0849   -0.0533    4.2705 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4105    1.4261    5.2678 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2395    2.0169    5.0610 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.1423    2.6341    3.1765 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.3863    0.9115    2.6920 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3075    2.3678    2.8212 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0712    0.6339    2.3913 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.3924    1.2460    0.5785 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.1868    3.0567    0.9527 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.2319    2.8381    0.5338 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0094    1.0756    0.0896 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.3653    1.8058   -1.6483 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.6499    3.5024   -1.2268 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.0376    3.2550   -1.7158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7787    1.5065   -2.1234 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7622    3.9870   -3.6959 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8773    2.3960   -5.4960 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0023    0.0944   -5.3416 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3592   -0.3993   -5.9342 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.5468   -2.2579   -4.9897 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.7767   -0.6460   -2.3783 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3531   -2.3619   -2.6908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1183    0.1543   -0.0241 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6259   -1.5420   -0.1718 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1407   -2.3848    1.4219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0800   -1.0576    2.1197 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2876   -2.5114    1.2811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3663   -1.6004    2.5733 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2254   -1.0799    0.8653 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7298    1.1989    1.0325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0936    1.2219    1.7027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4138    0.4575    0.0674 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6956   -1.0856    3.7722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8120    0.6232    3.2511 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1891   -0.0370    3.6707 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7260   -0.2981   -3.1802 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0962   -1.3118   -1.3093 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7611   -3.5920   -2.3100 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3961   -3.3069   -0.6104 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4218   -5.3282   -1.4134 H   0  0  0  0  0  0  0  0  0  0  0  0
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    0.7297   -4.2805    0.3803 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8043   -5.2615   -0.5920 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8903   -3.4786    0.3666 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7530   -2.2498   -0.1122 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9210   -2.0673   -1.2794 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9046   -3.7773   -1.6892 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0085   -1.6902   -3.0421 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2679   -3.3895   -3.4431 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6060   -3.1273   -4.0719 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0735   -1.0066   -5.0852 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1848    0.8722   -3.9538 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6795    0.0639   -3.4186 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3305   -0.3083   -6.0220 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6742    0.8241   -6.2583 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5242    1.8285   -6.6608 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9189    1.4859   -5.0378 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4525    3.7964   -5.3538 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1977    3.4744   -5.6371 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5510    3.1381   -3.1136 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3077    2.6717   -3.1629 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8563    4.9929   -3.9141 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0672    5.3780   -3.6895 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4420    5.9585   -1.6667 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2587    4.6635   -1.3042 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9313    3.1068   -0.9365 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9363    3.7332   -2.2787 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9325    4.5814   -0.7021 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
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 32100  1  0
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 36105  1  0
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 39110  1  0
 39111  1  0
 40112  1  0
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 50130  1  0
 50131  1  0
 51132  1  0
 51133  1  0
 52134  1  0
 52135  1  0
 52136  1  0
M  CHG  2  26  -1  30   1
M  END

PC(P-18:1(11Z)/P-18:1(9Z))
  Mrv1652304052008242D          

 53 52  0  0  1  0            999 V2000
   17.2908  -10.1901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   16.5855  -10.5973    0.0000 C   0  0  1  0  0  0  0  0  0  0  0  0
   15.8804  -10.1901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.9959  -10.5973    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   15.1752  -10.5973    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   16.5855  -11.4116    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   18.7012  -10.1901    0.0000 P   0  0  0  0  0  0  0  0  0  0  0  0
   19.1084  -10.8954    0.0000 O   0  5  0  0  0  0  0  0  0  0  0  0
   18.2941   -9.4849    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   19.4063   -9.7829    0.0000 O   0  0  0  0  0  0  0  0  0  0  0  0
   20.1115  -10.1901    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   20.8167   -9.7829    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   21.5219  -10.1901    0.0000 N   0  3  0  0  0  0  0  0  0  0  0  0
   21.1147  -10.8954    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.1746   -9.3375    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   22.2272  -10.5973    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   17.3747  -11.1477    0.0000 H   0  0  0  0  0  0  0  0  0  0  0  0
   14.4607  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6357  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9215  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.2074  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4932  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7791  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0649  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.3508  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.6367  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.9226  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    7.2084  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    6.3834  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    5.6692  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9551  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2410  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5268  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.8127  -10.1849    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.0986  -10.5980    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.8711  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   15.0461  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   14.3319  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   13.6178  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.9036  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   12.1895  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   11.4754  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.7613  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
   10.0471  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    9.2221  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    8.5079  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
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    5.6514  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9373  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.2231  -11.8240    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
    3.5090  -11.4109    0.0000 C   0  0  0  0  0  0  0  0  0  0  0  0
  1  4  1  0  0  0  0
  2  1  1  0  0  0  0
  2  6  1  0  0  0  0
  2 17  1  1  0  0  0
  3  2  1  0  0  0  0
  3  5  1  0  0  0  0
  4  7  1  0  0  0  0
  5 18  1  0  0  0  0
  6 36  1  0  0  0  0
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  7  9  2  0  0  0  0
  7 10  1  0  0  0  0
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 23 24  1  0  0  0  0
 24 25  1  0  0  0  0
 25 26  1  0  0  0  0
 26 27  1  0  0  0  0
 27 28  1  0  0  0  0
 28 29  2  0  0  0  0
 29 30  1  0  0  0  0
 30 31  1  0  0  0  0
 31 32  1  0  0  0  0
 32 33  1  0  0  0  0
 33 34  1  0  0  0  0
 34 35  1  0  0  0  0
 36 37  2  0  0  0  0
 37 38  1  0  0  0  0
 38 39  1  0  0  0  0
 39 40  1  0  0  0  0
 40 41  1  0  0  0  0
 41 42  1  0  0  0  0
 42 43  1  0  0  0  0
 43 44  1  0  0  0  0
 44 45  2  0  0  0  0
 45 46  1  0  0  0  0
 46 47  1  0  0  0  0
 47 48  1  0  0  0  0
 48 49  1  0  0  0  0
 49 50  1  0  0  0  0
 50 51  1  0  0  0  0
 51 52  1  0  0  0  0
 52 53  1  0  0  0  0
M  CHG  2   8  -1  13   1
M  END
> <DATABASE_ID>
HMDB0011301

> <DATABASE_NAME>
hmdb

> <SMILES>
[H][C@@](CO\C=C/CCCCCCCC\C=C/CCCCCC)(COP([O-])(=O)OCC[N+](C)(C)C)O\C=C/CCCCCC\C=C/CCCCCCCC

> <INCHI_IDENTIFIER>
InChI=1S/C44H84NO6P/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-36-39-48-42-44(43-51-52(46,47)50-41-38-45(3,4)5)49-40-37-35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-2/h16,18,21,23,36-37,39-40,44H,6-15,17,19-20,22,24-35,38,41-43H2,1-5H3/b18-16-,23-21-,39-36-,40-37-/t44-/m1/s1

> <INCHI_KEY>
IGBGWQZLCURPQD-JNWNPKLHSA-N

> <FORMULA>
C44H84NO6P

> <MOLECULAR_WEIGHT>
754.131

> <EXACT_MASS>
753.603626427

> <JCHEM_ACCEPTOR_COUNT>
4

> <JCHEM_ATOM_COUNT>
136

> <JCHEM_AVERAGE_POLARIZABILITY>
93.64056048065305

> <JCHEM_BIOAVAILABILITY>
0

> <JCHEM_DONOR_COUNT>
0

> <JCHEM_FORMAL_CHARGE>
0

> <JCHEM_GHOSE_FILTER>
0

> <JCHEM_IUPAC>
(2R)-3-[(1Z,11Z)-octadeca-1,11-dien-1-yloxy]-2-[(1Z,9Z)-octadeca-1,9-dien-1-yloxy]propyl 2-(trimethylazaniumyl)ethyl phosphate

> <ALOGPS_LOGP>
6.56

> <JCHEM_LOGP>
9.953777007861582

> <ALOGPS_LOGS>
-7.41

> <JCHEM_MDDR_LIKE_RULE>
0

> <JCHEM_NUMBER_OF_RINGS>
0

> <JCHEM_PHYSIOLOGICAL_CHARGE>
0

> <JCHEM_PKA_STRONGEST_ACIDIC>
1.8550790588734474

> <JCHEM_PKA_STRONGEST_BASIC>
-4.445743432968347

> <JCHEM_POLAR_SURFACE_AREA>
77.05

> <JCHEM_REFRACTIVITY>
237.17930000000004

> <JCHEM_ROTATABLE_BOND_COUNT>
40

> <JCHEM_RULE_OF_FIVE>
0

> <ALOGPS_SOLUBILITY>
3.12e-05 g/l

> <JCHEM_TRADITIONAL_IUPAC>
(2R)-3-[(1Z,11Z)-octadeca-1,11-dien-1-yloxy]-2-[(1Z,9Z)-octadeca-1,9-dien-1-yloxy]propyl 2-(trimethylammonio)ethyl phosphate

> <JCHEM_VEBER_RULE>
0

$$$$

HMDB0011301
     RDKit          3D
PC(P-18:1(11Z)/P-18:1(9Z))
136135  0  0  0  0  0  0  0  0999 V2000
    5.0572    0.1384    5.4161 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9986    0.3144    6.9307 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3130   -0.9377    7.4653 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9265   -0.9662    6.8181 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2102   -2.1952    7.2996 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8174   -2.1825    6.6333 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0386   -2.1866    5.1996 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6101   -1.2327    4.4127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1253   -0.0835    4.9004 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4998    1.2607    4.6568 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7030    1.6074    3.2235 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5799    1.6364    2.4284 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2624    2.0482    0.9986 C   0  0  0  0  0  0  0  0  0  0  0  0
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   -2.3124    2.5033   -2.1609 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0220    2.9505   -3.5183 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0889    2.0462   -4.5064 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4142    0.7658   -4.2067 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9886   -0.2055   -5.0194 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1270   -1.5314   -4.2773 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0972   -1.3680   -3.1533 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3026   -0.8920   -3.6973 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4364   -0.6947   -2.4720 P   0  0  0  0  0  5  0  0  0  0  0  0
   -7.6086   -1.5883   -2.7762 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9186    0.9098   -2.4586 O   0  0  0  0  0  1  0  0  0  0  0  0
   -5.8160   -1.1685   -0.9664 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7422   -0.8722    0.0340 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2465   -1.2740    1.3981 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0286   -0.6292    1.7948 N   0  0  0  0  0  4  0  0  0  0  0  0
   -3.9057   -1.5140    1.6232 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7946    0.6144    1.0983 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1662   -0.2835    3.2193 C   0  0  0  0  0  0  0  0  0  0  0  0
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    1.3863    0.9115    2.6920 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3075    2.3678    2.8212 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.0376    3.2550   -1.7158 H   0  0  0  0  0  0  0  0  0  0  0  0
   -2.7787    1.5065   -2.1234 H   0  0  0  0  0  0  0  0  0  0  0  0
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   -3.7767   -0.6460   -2.3783 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.3531   -2.3619   -2.6908 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.1183    0.1543   -0.0241 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.6259   -1.5420   -0.1718 H   0  0  0  0  0  0  0  0  0  0  0  0
   -6.1407   -2.3848    1.4219 H   0  0  0  0  0  0  0  0  0  0  0  0
   -7.0800   -1.0576    2.1197 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.2876   -2.5114    1.2811 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.3663   -1.6004    2.5733 H   0  0  0  0  0  0  0  0  0  0  0  0
   -3.2254   -1.0799    0.8653 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.7298    1.1989    1.0325 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.0936    1.2219    1.7027 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.4138    0.4575    0.0674 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.6956   -1.0856    3.7722 H   0  0  0  0  0  0  0  0  0  0  0  0
   -5.8120    0.6232    3.2511 H   0  0  0  0  0  0  0  0  0  0  0  0
   -4.1891   -0.0370    3.6707 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.7260   -0.2981   -3.1802 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.0962   -1.3118   -1.3093 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.7611   -3.5920   -2.3100 H   0  0  0  0  0  0  0  0  0  0  0  0
   -1.3961   -3.3069   -0.6104 H   0  0  0  0  0  0  0  0  0  0  0  0
   -0.4218   -5.3282   -1.4134 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.4610   -4.5222   -2.6911 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.7297   -4.2805    0.3803 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.8043   -5.2615   -0.5920 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.8903   -3.4786    0.3666 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.7530   -2.2498   -0.1122 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9210   -2.0673   -1.2794 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9046   -3.7773   -1.6892 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0085   -1.6902   -3.0421 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2679   -3.3895   -3.4431 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.6060   -3.1273   -4.0719 H   0  0  0  0  0  0  0  0  0  0  0  0
    5.0735   -1.0066   -5.0852 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.1848    0.8722   -3.9538 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.6795    0.0639   -3.4186 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.3305   -0.3083   -6.0220 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.6742    0.8241   -6.2583 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5242    1.8285   -6.6608 H   0  0  0  0  0  0  0  0  0  0  0  0
    0.9189    1.4859   -5.0378 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.4525    3.7964   -5.3538 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.1977    3.4744   -5.6371 H   0  0  0  0  0  0  0  0  0  0  0  0
    1.5510    3.1381   -3.1136 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.3077    2.6717   -3.1629 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.8563    4.9929   -3.9141 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.0672    5.3780   -3.6895 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.4420    5.9585   -1.6667 H   0  0  0  0  0  0  0  0  0  0  0  0
    2.2587    4.6635   -1.3042 H   0  0  0  0  0  0  0  0  0  0  0  0
    3.9313    3.1068   -0.9365 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9363    3.7332   -2.2787 H   0  0  0  0  0  0  0  0  0  0  0  0
    4.9325    4.5814   -0.7021 H   0  0  0  0  0  0  0  0  0  0  0  0
  1  2  1  0
  2  3  1  0
  3  4  1  0
  4  5  1  0
  5  6  1  0
  6  7  1  0
  7  8  2  0
  8  9  1  0
  9 10  1  0
 10 11  1  0
 11 12  1  0
 12 13  1  0
 13 14  1  0
 14 15  1  0
 15 16  1  0
 16 17  1  0
 17 18  2  0
 18 19  1  0
 19 20  1  0
 20 21  1  0
 21 22  1  0
 22 23  1  0
 23 24  1  0
 24 25  2  0
 24 26  1  0
 24 27  1  0
 27 28  1  0
 28 29  1  0
 29 30  1  0
 30 31  1  0
 30 32  1  0
 30 33  1  0
 21 34  1  0
 34 35  1  0
 35 36  2  0
 36 37  1  0
 37 38  1  0
 38 39  1  0
 39 40  1  0
 40 41  1  0
 41 42  1  0
 42 43  1  0
 43 44  2  0
 44 45  1  0
 45 46  1  0
 46 47  1  0
 47 48  1  0
 48 49  1  0
 49 50  1  0
 50 51  1  0
 51 52  1  0
  1 53  1  0
  1 54  1  0
  1 55  1  0
  2 56  1  0
  2 57  1  0
  3 58  1  0
  3 59  1  0
  4 60  1  0
  4 61  1  0
  5 62  1  0
  5 63  1  0
  6 64  1  0
  6 65  1  0
  7 66  1  0
  8 67  1  0
  9 68  1  0
  9 69  1  0
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 10 71  1  0
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 11 73  1  0
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 12 75  1  0
 13 76  1  0
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 14 78  1  0
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 15 80  1  0
 15 81  1  0
 16 82  1  0
 16 83  1  0
 17 84  1  0
 18 85  1  0
 20 86  1  0
 20 87  1  0
 21 88  1  6
 22 89  1  0
 22 90  1  0
 28 91  1  0
 28 92  1  0
 29 93  1  0
 29 94  1  0
 31 95  1  0
 31 96  1  0
 31 97  1  0
 32 98  1  0
 32 99  1  0
 32100  1  0
 33101  1  0
 33102  1  0
 33103  1  0
 35104  1  0
 36105  1  0
 37106  1  0
 37107  1  0
 38108  1  0
 38109  1  0
 39110  1  0
 39111  1  0
 40112  1  0
 40113  1  0
 41114  1  0
 41115  1  0
 42116  1  0
 42117  1  0
 43118  1  0
 44119  1  0
 45120  1  0
 45121  1  0
 46122  1  0
 46123  1  0
 47124  1  0
 47125  1  0
 48126  1  0
 48127  1  0
 49128  1  0
 49129  1  0
 50130  1  0
 50131  1  0
 51132  1  0
 51133  1  0
 52134  1  0
 52135  1  0
 52136  1  0
M  CHG  2  26  -1  30   1
M  END

HEADER    PROTEIN                                 05-APR-20   NONE
TITLE     NULL                                                        
COMPND    MOLECULE: PC(P-18:1(11Z)/P-18:1(9Z))                        
SOURCE    NULL                                                        
KEYWDS    NULL                                                        
EXPDTA    NULL                                                        
AUTHOR    Marvin                                                      
REVDAT   1   05-APR-20         0                                  
HETATM    1  C   UNK     0      32.276 -19.022   0.000  0.00  0.00           C+0
HETATM    2  C   UNK     0      30.960 -19.782   0.000  0.00  0.00           C+0
HETATM    3  C   UNK     0      29.643 -19.022   0.000  0.00  0.00           C+0
HETATM    4  O   UNK     0      33.592 -19.782   0.000  0.00  0.00           O+0
HETATM    5  O   UNK     0      28.327 -19.782   0.000  0.00  0.00           O+0
HETATM    6  O   UNK     0      30.960 -21.302   0.000  0.00  0.00           O+0
HETATM    7  P   UNK     0      34.909 -19.022   0.000  0.00  0.00           P+0
HETATM    8  O   UNK     0      35.669 -20.338   0.000  0.00  0.00           O-1
HETATM    9  O   UNK     0      34.149 -17.705   0.000  0.00  0.00           O+0
HETATM   10  O   UNK     0      36.225 -18.261   0.000  0.00  0.00           O+0
HETATM   11  C   UNK     0      37.541 -19.022   0.000  0.00  0.00           C+0
HETATM   12  C   UNK     0      38.858 -18.261   0.000  0.00  0.00           C+0
HETATM   13  N   UNK     0      40.174 -19.022   0.000  0.00  0.00           N+1
HETATM   14  C   UNK     0      39.414 -20.338   0.000  0.00  0.00           C+0
HETATM   15  C   UNK     0      41.393 -17.430   0.000  0.00  0.00           C+0
HETATM   16  C   UNK     0      41.491 -19.782   0.000  0.00  0.00           C+0
HETATM   17  H   UNK     0      32.433 -20.809   0.000  0.00  0.00           H+0
HETATM   18  C   UNK     0      26.993 -19.012   0.000  0.00  0.00           C+0
HETATM   19  C   UNK     0      25.453 -19.012   0.000  0.00  0.00           C+0
HETATM   20  C   UNK     0      24.120 -19.783   0.000  0.00  0.00           C+0
HETATM   21  C   UNK     0      22.787 -19.012   0.000  0.00  0.00           C+0
HETATM   22  C   UNK     0      21.454 -19.783   0.000  0.00  0.00           C+0
HETATM   23  C   UNK     0      20.121 -19.012   0.000  0.00  0.00           C+0
HETATM   24  C   UNK     0      18.788 -19.783   0.000  0.00  0.00           C+0
HETATM   25  C   UNK     0      17.455 -19.012   0.000  0.00  0.00           C+0
HETATM   26  C   UNK     0      16.122 -19.783   0.000  0.00  0.00           C+0
HETATM   27  C   UNK     0      14.789 -19.012   0.000  0.00  0.00           C+0
HETATM   28  C   UNK     0      13.456 -19.783   0.000  0.00  0.00           C+0
HETATM   29  C   UNK     0      11.916 -19.783   0.000  0.00  0.00           C+0
HETATM   30  C   UNK     0      10.583 -19.012   0.000  0.00  0.00           C+0
HETATM   31  C   UNK     0       9.250 -19.783   0.000  0.00  0.00           C+0
HETATM   32  C   UNK     0       7.917 -19.012   0.000  0.00  0.00           C+0
HETATM   33  C   UNK     0       6.583 -19.783   0.000  0.00  0.00           C+0
HETATM   34  C   UNK     0       5.250 -19.012   0.000  0.00  0.00           C+0
HETATM   35  C   UNK     0       3.917 -19.783   0.000  0.00  0.00           C+0
HETATM   36  C   UNK     0      29.626 -22.071   0.000  0.00  0.00           C+0
HETATM   37  C   UNK     0      28.086 -22.071   0.000  0.00  0.00           C+0
HETATM   38  C   UNK     0      26.753 -21.300   0.000  0.00  0.00           C+0
HETATM   39  C   UNK     0      25.420 -22.071   0.000  0.00  0.00           C+0
HETATM   40  C   UNK     0      24.087 -21.300   0.000  0.00  0.00           C+0
HETATM   41  C   UNK     0      22.754 -22.071   0.000  0.00  0.00           C+0
HETATM   42  C   UNK     0      21.421 -21.300   0.000  0.00  0.00           C+0
HETATM   43  C   UNK     0      20.088 -22.071   0.000  0.00  0.00           C+0
HETATM   44  C   UNK     0      18.755 -21.300   0.000  0.00  0.00           C+0
HETATM   45  C   UNK     0      17.215 -21.300   0.000  0.00  0.00           C+0
HETATM   46  C   UNK     0      15.881 -22.071   0.000  0.00  0.00           C+0
HETATM   47  C   UNK     0      14.548 -21.300   0.000  0.00  0.00           C+0
HETATM   48  C   UNK     0      13.215 -22.071   0.000  0.00  0.00           C+0
HETATM   49  C   UNK     0      11.882 -21.300   0.000  0.00  0.00           C+0
HETATM   50  C   UNK     0      10.549 -22.071   0.000  0.00  0.00           C+0
HETATM   51  C   UNK     0       9.216 -21.300   0.000  0.00  0.00           C+0
HETATM   52  C   UNK     0       7.883 -22.071   0.000  0.00  0.00           C+0
HETATM   53  C   UNK     0       6.550 -21.300   0.000  0.00  0.00           C+0
CONECT    1    4    2                                                       
CONECT    2    1    6   17    3                                             
CONECT    3    2    5                                                       
CONECT    4    1    7                                                       
CONECT    5    3   18                                                       
CONECT    6    2   36                                                       
CONECT    7    4    8    9   10                                             
CONECT    8    7                                                            
CONECT    9    7                                                            
CONECT   10    7   11                                                       
CONECT   11   10   12                                                       
CONECT   12   11   13                                                       
CONECT   13   12   14   15   16                                             
CONECT   14   13                                                            
CONECT   15   13                                                            
CONECT   16   13                                                            
CONECT   17    2                                                            
CONECT   18    5   19                                                       
CONECT   19   18   20                                                       
CONECT   20   19   21                                                       
CONECT   21   20   22                                                       
CONECT   22   21   23                                                       
CONECT   23   22   24                                                       
CONECT   24   23   25                                                       
CONECT   25   24   26                                                       
CONECT   26   25   27                                                       
CONECT   27   26   28                                                       
CONECT   28   27   29                                                       
CONECT   29   28   30                                                       
CONECT   30   29   31                                                       
CONECT   31   30   32                                                       
CONECT   32   31   33                                                       
CONECT   33   32   34                                                       
CONECT   34   33   35                                                       
CONECT   35   34                                                            
CONECT   36    6   37                                                       
CONECT   37   36   38                                                       
CONECT   38   37   39                                                       
CONECT   39   38   40                                                       
CONECT   40   39   41                                                       
CONECT   41   40   42                                                       
CONECT   42   41   43                                                       
CONECT   43   42   44                                                       
CONECT   44   43   45                                                       
CONECT   45   44   46                                                       
CONECT   46   45   47                                                       
CONECT   47   46   48                                                       
CONECT   48   47   49                                                       
CONECT   49   48   50                                                       
CONECT   50   49   51                                                       
CONECT   51   50   52                                                       
CONECT   52   51   53                                                       
CONECT   53   52                                                            
MASTER        0    0    0    0    0    0    0    0   53    0  104    0
END

COMPND    HMDB0011301
HETATM    1  C1  UNL     1       5.057   0.138   5.416  1.00  0.00           C  
HETATM    2  C2  UNL     1       4.999   0.314   6.931  1.00  0.00           C  
HETATM    3  C3  UNL     1       4.313  -0.938   7.465  1.00  0.00           C  
HETATM    4  C4  UNL     1       2.926  -0.966   6.818  1.00  0.00           C  
HETATM    5  C5  UNL     1       2.210  -2.195   7.300  1.00  0.00           C  
HETATM    6  C6  UNL     1       0.817  -2.182   6.633  1.00  0.00           C  
HETATM    7  C7  UNL     1       1.039  -2.187   5.200  1.00  0.00           C  
HETATM    8  C8  UNL     1       0.610  -1.233   4.413  1.00  0.00           C  
HETATM    9  C9  UNL     1      -0.125  -0.083   4.900  1.00  0.00           C  
HETATM   10  C10 UNL     1       0.500   1.261   4.657  1.00  0.00           C  
HETATM   11  C11 UNL     1       0.703   1.607   3.224  1.00  0.00           C  
HETATM   12  C12 UNL     1      -0.580   1.636   2.428  1.00  0.00           C  
HETATM   13  C13 UNL     1      -0.262   2.048   0.999  1.00  0.00           C  
HETATM   14  C14 UNL     1      -1.512   2.062   0.155  1.00  0.00           C  
HETATM   15  C15 UNL     1      -1.111   2.515  -1.251  1.00  0.00           C  
HETATM   16  C16 UNL     1      -2.312   2.503  -2.161  1.00  0.00           C  
HETATM   17  C17 UNL     1      -2.022   2.951  -3.518  1.00  0.00           C  
HETATM   18  C18 UNL     1      -2.089   2.046  -4.506  1.00  0.00           C  
HETATM   19  O1  UNL     1      -2.414   0.766  -4.207  1.00  0.00           O  
HETATM   20  C19 UNL     1      -2.989  -0.206  -5.019  1.00  0.00           C  
HETATM   21  C20 UNL     1      -3.127  -1.531  -4.277  1.00  0.00           C  
HETATM   22  C21 UNL     1      -4.097  -1.368  -3.153  1.00  0.00           C  
HETATM   23  O2  UNL     1      -5.303  -0.892  -3.697  1.00  0.00           O  
HETATM   24  P1  UNL     1      -6.436  -0.695  -2.472  1.00  0.00           P  
HETATM   25  O3  UNL     1      -7.609  -1.588  -2.776  1.00  0.00           O  
HETATM   26  O4  UNL     1      -6.919   0.910  -2.459  1.00  0.00           O1-
HETATM   27  O5  UNL     1      -5.816  -1.168  -0.966  1.00  0.00           O  
HETATM   28  C22 UNL     1      -6.742  -0.872   0.034  1.00  0.00           C  
HETATM   29  C23 UNL     1      -6.246  -1.274   1.398  1.00  0.00           C  
HETATM   30  N1  UNL     1      -5.029  -0.629   1.795  1.00  0.00           N1+
HETATM   31  C24 UNL     1      -3.906  -1.514   1.623  1.00  0.00           C  
HETATM   32  C25 UNL     1      -4.795   0.614   1.098  1.00  0.00           C  
HETATM   33  C26 UNL     1      -5.166  -0.284   3.219  1.00  0.00           C  
HETATM   34  O6  UNL     1      -1.865  -2.015  -3.865  1.00  0.00           O  
HETATM   35  C27 UNL     1      -1.027  -1.317  -3.023  1.00  0.00           C  
HETATM   36  C28 UNL     1      -0.537  -1.929  -1.919  1.00  0.00           C  
HETATM   37  C29 UNL     1      -0.903  -3.312  -1.643  1.00  0.00           C  
HETATM   38  C30 UNL     1       0.166  -4.332  -1.627  1.00  0.00           C  
HETATM   39  C31 UNL     1       1.245  -4.235  -0.656  1.00  0.00           C  
HETATM   40  C32 UNL     1       2.225  -3.168  -0.558  1.00  0.00           C  
HETATM   41  C33 UNL     1       3.193  -2.884  -1.622  1.00  0.00           C  
HETATM   42  C34 UNL     1       2.749  -2.469  -2.974  1.00  0.00           C  
HETATM   43  C35 UNL     1       3.938  -2.255  -3.881  1.00  0.00           C  
HETATM   44  C36 UNL     1       4.205  -1.126  -4.430  1.00  0.00           C  
HETATM   45  C37 UNL     1       3.366   0.108  -4.233  1.00  0.00           C  
HETATM   46  C38 UNL     1       2.818   0.591  -5.526  1.00  0.00           C  
HETATM   47  C39 UNL     1       1.911   1.736  -5.574  1.00  0.00           C  
HETATM   48  C40 UNL     1       2.288   3.069  -5.084  1.00  0.00           C  
HETATM   49  C41 UNL     1       2.552   3.271  -3.635  1.00  0.00           C  
HETATM   50  C42 UNL     1       2.911   4.756  -3.367  1.00  0.00           C  
HETATM   51  C43 UNL     1       3.160   4.906  -1.897  1.00  0.00           C  
HETATM   52  C44 UNL     1       4.298   4.021  -1.437  1.00  0.00           C  
HETATM   53  H1  UNL     1       4.199   0.631   4.930  1.00  0.00           H  
HETATM   54  H2  UNL     1       5.069  -0.958   5.178  1.00  0.00           H  
HETATM   55  H3  UNL     1       6.043   0.510   5.092  1.00  0.00           H  
HETATM   56  H4  UNL     1       6.002   0.413   7.370  1.00  0.00           H  
HETATM   57  H5  UNL     1       4.323   1.156   7.218  1.00  0.00           H  
HETATM   58  H6  UNL     1       4.192  -0.886   8.561  1.00  0.00           H  
HETATM   59  H7  UNL     1       4.905  -1.807   7.173  1.00  0.00           H  
HETATM   60  H8  UNL     1       3.014  -1.006   5.714  1.00  0.00           H  
HETATM   61  H9  UNL     1       2.340  -0.081   7.152  1.00  0.00           H  
HETATM   62  H10 UNL     1       2.120  -2.245   8.393  1.00  0.00           H  
HETATM   63  H11 UNL     1       2.765  -3.097   6.974  1.00  0.00           H  
HETATM   64  H12 UNL     1       0.199  -1.430   7.085  1.00  0.00           H  
HETATM   65  H13 UNL     1       0.409  -3.210   6.914  1.00  0.00           H  
HETATM   66  H14 UNL     1       1.600  -3.060   4.801  1.00  0.00           H  
HETATM   67  H15 UNL     1       0.811  -1.292   3.320  1.00  0.00           H  
HETATM   68  H16 UNL     1      -0.517  -0.111   5.922  1.00  0.00           H  
HETATM   69  H17 UNL     1      -1.085  -0.053   4.271  1.00  0.00           H  
HETATM   70  H18 UNL     1       1.410   1.426   5.268  1.00  0.00           H  
HETATM   71  H19 UNL     1      -0.239   2.017   5.061  1.00  0.00           H  
HETATM   72  H20 UNL     1       1.142   2.634   3.177  1.00  0.00           H  
HETATM   73  H21 UNL     1       1.386   0.912   2.692  1.00  0.00           H  
HETATM   74  H22 UNL     1      -1.308   2.368   2.821  1.00  0.00           H  
HETATM   75  H23 UNL     1      -1.071   0.634   2.391  1.00  0.00           H  
HETATM   76  H24 UNL     1       0.392   1.246   0.579  1.00  0.00           H  
HETATM   77  H25 UNL     1       0.187   3.057   0.953  1.00  0.00           H  
HETATM   78  H26 UNL     1      -2.232   2.838   0.534  1.00  0.00           H  
HETATM   79  H27 UNL     1      -2.009   1.076   0.090  1.00  0.00           H  
HETATM   80  H28 UNL     1      -0.365   1.806  -1.648  1.00  0.00           H  
HETATM   81  H29 UNL     1      -0.650   3.502  -1.227  1.00  0.00           H  
HETATM   82  H30 UNL     1      -3.038   3.255  -1.716  1.00  0.00           H  
HETATM   83  H31 UNL     1      -2.779   1.507  -2.123  1.00  0.00           H  
HETATM   84  H32 UNL     1      -1.762   3.987  -3.696  1.00  0.00           H  
HETATM   85  H33 UNL     1      -1.877   2.396  -5.496  1.00  0.00           H  
HETATM   86  H34 UNL     1      -4.002   0.094  -5.342  1.00  0.00           H  
HETATM   87  H35 UNL     1      -2.359  -0.399  -5.934  1.00  0.00           H  
HETATM   88  H36 UNL     1      -3.547  -2.258  -4.990  1.00  0.00           H  
HETATM   89  H37 UNL     1      -3.777  -0.646  -2.378  1.00  0.00           H  
HETATM   90  H38 UNL     1      -4.353  -2.362  -2.691  1.00  0.00           H  
HETATM   91  H39 UNL     1      -7.118   0.154  -0.024  1.00  0.00           H  
HETATM   92  H40 UNL     1      -7.626  -1.542  -0.172  1.00  0.00           H  
HETATM   93  H41 UNL     1      -6.141  -2.385   1.422  1.00  0.00           H  
HETATM   94  H42 UNL     1      -7.080  -1.058   2.120  1.00  0.00           H  
HETATM   95  H43 UNL     1      -4.288  -2.511   1.281  1.00  0.00           H  
HETATM   96  H44 UNL     1      -3.366  -1.600   2.573  1.00  0.00           H  
HETATM   97  H45 UNL     1      -3.225  -1.080   0.865  1.00  0.00           H  
HETATM   98  H46 UNL     1      -5.730   1.199   1.032  1.00  0.00           H  
HETATM   99  H47 UNL     1      -4.094   1.222   1.703  1.00  0.00           H  
HETATM  100  H48 UNL     1      -4.414   0.457   0.067  1.00  0.00           H  
HETATM  101  H49 UNL     1      -5.696  -1.086   3.772  1.00  0.00           H  
HETATM  102  H50 UNL     1      -5.812   0.623   3.251  1.00  0.00           H  
HETATM  103  H51 UNL     1      -4.189  -0.037   3.671  1.00  0.00           H  
HETATM  104  H52 UNL     1      -0.726  -0.298  -3.180  1.00  0.00           H  
HETATM  105  H53 UNL     1       0.096  -1.312  -1.309  1.00  0.00           H  
HETATM  106  H54 UNL     1      -1.761  -3.592  -2.310  1.00  0.00           H  
HETATM  107  H55 UNL     1      -1.396  -3.307  -0.610  1.00  0.00           H  
HETATM  108  H56 UNL     1      -0.422  -5.328  -1.413  1.00  0.00           H  
HETATM  109  H57 UNL     1       0.461  -4.522  -2.691  1.00  0.00           H  
HETATM  110  H58 UNL     1       0.730  -4.280   0.380  1.00  0.00           H  
HETATM  111  H59 UNL     1       1.804  -5.261  -0.592  1.00  0.00           H  
HETATM  112  H60 UNL     1       2.890  -3.479   0.367  1.00  0.00           H  
HETATM  113  H61 UNL     1       1.753  -2.250  -0.112  1.00  0.00           H  
HETATM  114  H62 UNL     1       3.921  -2.067  -1.279  1.00  0.00           H  
HETATM  115  H63 UNL     1       3.905  -3.777  -1.689  1.00  0.00           H  
HETATM  116  H64 UNL     1       2.008  -1.690  -3.042  1.00  0.00           H  
HETATM  117  H65 UNL     1       2.268  -3.390  -3.443  1.00  0.00           H  
HETATM  118  H66 UNL     1       4.606  -3.127  -4.072  1.00  0.00           H  
HETATM  119  H67 UNL     1       5.073  -1.007  -5.085  1.00  0.00           H  
HETATM  120  H68 UNL     1       4.185   0.872  -3.954  1.00  0.00           H  
HETATM  121  H69 UNL     1       2.679   0.064  -3.419  1.00  0.00           H  
HETATM  122  H70 UNL     1       2.330  -0.308  -6.022  1.00  0.00           H  
HETATM  123  H71 UNL     1       3.674   0.824  -6.258  1.00  0.00           H  
HETATM  124  H72 UNL     1       1.524   1.828  -6.661  1.00  0.00           H  
HETATM  125  H73 UNL     1       0.919   1.486  -5.038  1.00  0.00           H  
HETATM  126  H74 UNL     1       1.452   3.796  -5.354  1.00  0.00           H  
HETATM  127  H75 UNL     1       3.198   3.474  -5.637  1.00  0.00           H  
HETATM  128  H76 UNL     1       1.551   3.138  -3.114  1.00  0.00           H  
HETATM  129  H77 UNL     1       3.308   2.672  -3.163  1.00  0.00           H  
HETATM  130  H78 UNL     1       3.856   4.993  -3.914  1.00  0.00           H  
HETATM  131  H79 UNL     1       2.067   5.378  -3.690  1.00  0.00           H  
HETATM  132  H80 UNL     1       3.442   5.959  -1.667  1.00  0.00           H  
HETATM  133  H81 UNL     1       2.259   4.664  -1.304  1.00  0.00           H  
HETATM  134  H82 UNL     1       3.931   3.107  -0.936  1.00  0.00           H  
HETATM  135  H83 UNL     1       4.936   3.733  -2.279  1.00  0.00           H  
HETATM  136  H84 UNL     1       4.933   4.581  -0.702  1.00  0.00           H  
CONECT    1    2   53   54   55
CONECT    2    3   56   57
CONECT    3    4   58   59
CONECT    4    5   60   61
CONECT    5    6   62   63
CONECT    6    7   64   65
CONECT    7    8    8   66
CONECT    8    9   67
CONECT    9   10   68   69
CONECT   10   11   70   71
CONECT   11   12   72   73
CONECT   12   13   74   75
CONECT   13   14   76   77
CONECT   14   15   78   79
CONECT   15   16   80   81
CONECT   16   17   82   83
CONECT   17   18   18   84
CONECT   18   19   85
CONECT   19   20
CONECT   20   21   86   87
CONECT   21   22   34   88
CONECT   22   23   89   90
CONECT   23   24
CONECT   24   25   25   26   27
CONECT   27   28
CONECT   28   29   91   92
CONECT   29   30   93   94
CONECT   30   31   32   33
CONECT   31   95   96   97
CONECT   32   98   99  100
CONECT   33  101  102  103
CONECT   34   35
CONECT   35   36   36  104
CONECT   36   37  105
CONECT   37   38  106  107
CONECT   38   39  108  109
CONECT   39   40  110  111
CONECT   40   41  112  113
CONECT   41   42  114  115
CONECT   42   43  116  117
CONECT   43   44   44  118
CONECT   44   45  119
CONECT   45   46  120  121
CONECT   46   47  122  123
CONECT   47   48  124  125
CONECT   48   49  126  127
CONECT   49   50  128  129
CONECT   50   51  130  131
CONECT   51   52  132  133
CONECT   52  134  135  136
END

HMDB0011301
     RDKit          3D
PC(P-18:1(11Z)/P-18:1(9Z))
136135  0  0  0  0  0  0  0  0999 V2000
    5.0572    0.1384    5.4161 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.9986    0.3144    6.9307 C   0  0  0  0  0  0  0  0  0  0  0  0
    4.3130   -0.9377    7.4653 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.9265   -0.9662    6.8181 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2102   -2.1952    7.2996 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.8174   -2.1825    6.6333 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.0386   -2.1866    5.1996 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.6101   -1.2327    4.4127 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.1253   -0.0835    4.9004 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.4998    1.2607    4.6568 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.7030    1.6074    3.2235 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5799    1.6364    2.4284 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.2624    2.0482    0.9986 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.5116    2.0625    0.1551 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.1113    2.5154   -1.2509 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.3124    2.5033   -2.1609 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0220    2.9505   -3.5183 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.0889    2.0462   -4.5064 C   0  0  0  0  0  0  0  0  0  0  0  0
   -2.4142    0.7658   -4.2067 O   0  0  0  0  0  0  0  0  0  0  0  0
   -2.9886   -0.2055   -5.0194 C   0  0  0  0  0  0  0  0  0  0  0  0
   -3.1270   -1.5314   -4.2773 C   0  0  2  0  0  0  0  0  0  0  0  0
   -4.0972   -1.3680   -3.1533 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.3026   -0.8920   -3.6973 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.4364   -0.6947   -2.4720 P   0  0  0  0  0  5  0  0  0  0  0  0
   -7.6086   -1.5883   -2.7762 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.9186    0.9098   -2.4586 O   0  0  0  0  0  1  0  0  0  0  0  0
   -5.8160   -1.1685   -0.9664 O   0  0  0  0  0  0  0  0  0  0  0  0
   -6.7422   -0.8722    0.0340 C   0  0  0  0  0  0  0  0  0  0  0  0
   -6.2465   -1.2740    1.3981 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.0286   -0.6292    1.7948 N   0  0  0  0  0  4  0  0  0  0  0  0
   -3.9057   -1.5140    1.6232 C   0  0  0  0  0  0  0  0  0  0  0  0
   -4.7946    0.6144    1.0983 C   0  0  0  0  0  0  0  0  0  0  0  0
   -5.1662   -0.2835    3.2193 C   0  0  0  0  0  0  0  0  0  0  0  0
   -1.8650   -2.0149   -3.8652 O   0  0  0  0  0  0  0  0  0  0  0  0
   -1.0271   -1.3167   -3.0229 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.5370   -1.9293   -1.9194 C   0  0  0  0  0  0  0  0  0  0  0  0
   -0.9026   -3.3122   -1.6431 C   0  0  0  0  0  0  0  0  0  0  0  0
    0.1658   -4.3324   -1.6268 C   0  0  0  0  0  0  0  0  0  0  0  0
    1.2448   -4.2346   -0.6561 C   0  0  0  0  0  0  0  0  0  0  0  0
    2.2253   -3.1680   -0.5579 C   0  0  0  0  0  0  0  0  0  0  0  0
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M  CHG  2  26  -1  30   1
M  END

View in JSmol View Stereo Labels

Synonyms

Value	Source
(2R)-3-[(1Z,11Z)-Octadeca-1,11-dien-1-yloxy]-2-[(1Z,9Z)-octadeca-1,9-dien-1-yloxy]propyl 2-(trimethylazaniumyl)ethyl phosphoric acid	Generator, HMDB

Chemical Formula

C₄₄H₈₄NO₆P

Average Molecular Weight

754.131

Monoisotopic Molecular Weight

753.603626427

IUPAC Name

(2R)-3-[(1Z,11Z)-octadeca-1,11-dien-1-yloxy]-2-[(1Z,9Z)-octadeca-1,9-dien-1-yloxy]propyl 2-(trimethylazaniumyl)ethyl phosphate

Traditional Name

(2R)-3-[(1Z,11Z)-octadeca-1,11-dien-1-yloxy]-2-[(1Z,9Z)-octadeca-1,9-dien-1-yloxy]propyl 2-(trimethylammonio)ethyl phosphate

CAS Registry Number

Not Available

SMILES

[H][C@@](CO\C=C/CCCCCCCC\C=C/CCCCCC)(COP([O-])(=O)OCC[N+](C)(C)C)O\C=C/CCCCCC\C=C/CCCCCCCC

InChI Identifier

InChI=1S/C44H84NO6P/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-36-39-48-42-44(43-51-52(46,47)50-41-38-45(3,4)5)49-40-37-35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-2/h16,18,21,23,36-37,39-40,44H,6-15,17,19-20,22,24-35,38,41-43H2,1-5H3/b18-16-,23-21-,39-36-,40-37-/t44-/m1/s1

InChI Key

IGBGWQZLCURPQD-JNWNPKLHSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as glycerophosphocholines. These are lipids containing a glycerol moiety carrying a phosphocholine at the 3-position.

Kingdom

Organic compounds

Super Class

Lipids and lipid-like molecules

Class

Glycerophospholipids

Sub Class

Glycerophosphocholines

Direct Parent

Glycerophosphocholines

Alternative Parents

Substituents

Glycero-3-phosphocholine
Phosphocholine
Glycerol vinyl ether
Dialkyl phosphate
Organic phosphoric acid derivative
Phosphoric acid ester
Alkyl phosphate
Quaternary ammonium salt
Tetraalkylammonium salt
Amine
Organic salt
Hydrocarbon derivative
Organic oxide
Organopnictogen compound
Organic oxygen compound
Organooxygen compound
Organonitrogen compound
Organic nitrogen compound
Aliphatic acyclic compound

Molecular Framework

Aliphatic acyclic compounds

External Descriptors

Not Available

Ontology

Physiological effect

Health effect

Cancer

Breast cancer (PMID: 9468591)
Cervical cancer (PMID: 26566624)

Ulcerative colitis (PMID: 33440385)
Atherosclerosis (PMID: 21475195)

Disposition

Biological location

Tissue

All Tissues (HMDB: HMDB0011301)

Excreta

Biofluid or Excreta

Urine (PMID: 24023812)
Feces (PMID: 23210743)

Non-excretory biofluid

Biofluid or Excreta

Saliva (HMDB: HMDB0011301)
Blood (PMID: 28278231)

Cellular substructure

Membrane (HMDB: HMDB0011301)
Extracellular (HMDB: HMDB0011301)
golgi apparatus membrane (HMDB: HMDB0011301)
cell membrane (HMDB: HMDB0011301)

Organelle

endoplasmic reticulum (HMDB: HMDB0011301)

Cell

All cells and tissues (HMDB: HMDB0011301)

Guinea hen (FooDB: FOOD00373)
Ostrich (FooDB: FOOD00422)
Velvet duck (FooDB: FOOD00427)
Pheasant (FooDB: FOOD00430)
Squab (FooDB: FOOD00481)
Turkey (FooDB: FOOD00494)
Quail (FooDB: FOOD00541)
Anatidae (FooDB: FOOD00576)
Rock ptarmigan (FooDB: FOOD00597)
Columbidae (Dove, Pigeon) (FooDB: FOOD00610)
Chicken (FooDB: FOOD00329)
Mallard duck (FooDB: FOOD00353)
Emu (FooDB: FOOD00360)
Greylag goose (FooDB: FOOD00368)

Equine

Horse (FooDB: FOOD00378)

Lagomorph

Ovis

Sheep (Mutton, Lamb) (FooDB: FOOD00473)

Bovine

Venison

Deer (FooDB: FOOD00524)
Mule deer (FooDB: FOOD00348)
Elk (FooDB: FOOD00359)

Caprae

Domestic goat (FooDB: FOOD00529)

Swine

Domestic pig (FooDB: FOOD00536)
Wild boar (FooDB: FOOD00307)

Process

Naturally occurring process

Biological process

Biochemical pathway

Metabolic pathway

Phosphatidylcholine Biosynthesis (HMDB: HMDB0011301)

Signaling pathway

Apoptosis (PMID: 23350810)

Biochemical process

Lipid transport (PMID: 21979151)

Cellular process

Apoptosis (PMID: 23350810)
Cell proliferation (PMID: 23350810)

Role

Biological role

Nutrient

Nutrient (PMID: 28411170)

Industrial application

Pharmaceutical industry

Biomarker

Physical Properties

State

Solid

Experimental Molecular Properties

Property	Value	Reference
Melting Point	Not Available	Not Available
Boiling Point	Not Available	Not Available
Water Solubility	Not Available	Not Available
LogP	Not Available	Not Available

Experimental Chromatographic Properties

Not Available

Predicted Molecular Properties

Property	Value	Source
logP	6.56	ALOGPS
logP	9.95	ChemAxon
logS	-7.4	ALOGPS
pKa (Strongest Acidic)	1.86	ChemAxon
pKa (Strongest Basic)	-4.4	ChemAxon
Physiological Charge	0	ChemAxon
Hydrogen Acceptor Count	4	ChemAxon
Hydrogen Donor Count	0	ChemAxon
Polar Surface Area	77.05 Å²	ChemAxon
Rotatable Bond Count	40	ChemAxon
Refractivity	237.18 m³·mol⁻¹	ChemAxon
Polarizability	93.64 Å³	ChemAxon
Number of Rings	0	ChemAxon
Bioavailability	No	ChemAxon
Rule of Five	No	ChemAxon
Ghose Filter	No	ChemAxon
Veber's Rule	No	ChemAxon
MDDR-like Rule	No	ChemAxon

Predicted Chromatographic Properties

Predicted Collision Cross Sections

Predictor	Adduct Type	CCS Value (Å²)	Reference
DeepCCS	[M+H]+	298.519	30932474
DeepCCS	[M-H]-	296.624	30932474
DeepCCS	[M-2H]-	329.974	30932474
DeepCCS	[M+Na]+	305.438	30932474
AllCCS	[M+H]+	290.5	32859911
AllCCS	[M+H-H2O]+	290.3	32859911
AllCCS	[M+NH4]+	290.6	32859911
AllCCS	[M+Na]+	290.6	32859911
AllCCS	[M-H]-	277.4	32859911
AllCCS	[M+Na-2H]-	282.2	32859911
AllCCS	[M+HCOO]-	287.6	32859911

Predicted Kovats Retention Indices

Underivatized

Metabolite	SMILES	Kovats RI Value	Column Type	Reference
PC(P-18:1(11Z)/P-18:1(9Z))	[H][C@@](CO\C=C/CCCCCCCC\C=C/CCCCCC)(COP([O-])(=O)OCC[N+](C)(C)C)O\C=C/CCCCCC\C=C/CCCCCCCC	5287.2	Standard polar	33892256
PC(P-18:1(11Z)/P-18:1(9Z))	[H][C@@](CO\C=C/CCCCCCCC\C=C/CCCCCC)(COP([O-])(=O)OCC[N+](C)(C)C)O\C=C/CCCCCC\C=C/CCCCCCCC	4307.5	Standard non polar	33892256
PC(P-18:1(11Z)/P-18:1(9Z))	[H][C@@](CO\C=C/CCCCCCCC\C=C/CCCCCC)(COP([O-])(=O)OCC[N+](C)(C)C)O\C=C/CCCCCC\C=C/CCCCCCCC	5076.9	Semi standard non polar	33892256

Spectra

MS/MS Spectra

Spectrum Type	Description	Splash Key	Deposition Date	Source	View
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 10V, Positive-QTOF	splash10-000i-9120232300-10fbd7fdee0f53f8adcd	2019-02-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 20V, Positive-QTOF	splash10-052k-9373274000-bd43be4882e760d1d6aa	2019-02-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 40V, Positive-QTOF	splash10-007a-9062153000-4aaf365361d5dce46d90	2019-02-22	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 10V, Negative-QTOF	splash10-0udi-0060003900-e74a999b3e619fc0559c	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 20V, Negative-QTOF	splash10-014i-1090206100-4cc859ff8fe827154e72	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 40V, Negative-QTOF	splash10-016r-5191500000-e161eba351c917d962ed	2019-02-23	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 10V, Positive-QTOF	splash10-0udi-4200007900-bd1fe2f36241338e9beb	2021-09-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 20V, Positive-QTOF	splash10-001i-7400009000-0dd3301a5a54b715d080	2021-09-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 40V, Positive-QTOF	splash10-001i-3900000000-66883651a4358fd04661	2021-09-21	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 10V, Negative-QTOF	splash10-0udi-0000000900-5724b5f07d5e290f3026	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 20V, Negative-QTOF	splash10-0udi-0010013900-e642bdab118226af52c5	2021-09-25	Wishart Lab	View Spectrum
Predicted LC-MS/MS	Predicted LC-MS/MS Spectrum - PC(P-18:1(11Z)/P-18:1(9Z)) 40V, Negative-QTOF	splash10-004i-9113210000-5a7bc98eaa2a763b8d89	2021-09-25	Wishart Lab	View Spectrum

Biological Properties

Cellular Locations

Extracellular
Membrane

Biospecimen Locations

Blood
Feces
Saliva
Urine

Tissue Locations

All Tissues

Pathways

Not Available

Name	SMPDB/PathBank	KEGG

Normal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Blood	Detected and Quantified	44.5 (37.6-53.3) uM	Newborn (0-30 days old)	Not Available	Normal	25754623	details
Blood	Detected and Quantified	267.03(66.1) uM	Adult (>18 years old)	Both	Normal	26010610	details
Blood	Detected and Quantified	212 (183-244) uM	Infant (0-1 year old)	Not Available	Normal	25754623	details
Blood	Detected and Quantified	250.7 +/- 47.2 uM	Adult (>18 years old)	Both	Normal	28278231	details
Feces	Detected and Quantified	0.84 +/- 2 nmol/g wet feces	Adult (>18 years old)	Both	Normal	27624970	details
Feces	Detected and Quantified	1.46 +/- 2.13 nmol/g wet feces	Adult (>18 years old)	Both	Normal	27624970	details
Saliva	Detected and Quantified	0.200 +/- 0.031 uM	Adult (>18 years old)	Both	Normal	Zerihun T. Dame, ...	details
Urine	Detected and Quantified	0.016 (0.0021-0.045) umol/mmol creatinine	Adult (>18 years old)	Both	Normal	24023812	details

Abnormal Concentrations

Biospecimen	Status	Value	Age	Sex	Condition	Reference	Details
Blood	Detected and Quantified	220.75(59.14) uM	Adult (>18 years old)	Both	Heart failure with preserved ejection fraction	26010610	details
Blood	Detected and Quantified	192.7 +/- 50.0 uM	Children (1-13 years old)	Both	Obesity	Metabolomics reve...	details
Blood	Detected and Quantified	233.6 +/- 68.4 uM	Children (1-13 years old)	Both	Obesity	Metabolomics reve...	details
Blood	Detected and Quantified	155.673 (140.706) uM	Adult (>18 years old)	Female	Pregnancy with fetus having congenital heart defect	24704061	details
Blood	Detected and Quantified	279.018 (74.520) uM	Adult (>18 years old)	Female	Pregnancy	24704061	details
Feces	Detected but not Quantified	Not Quantified	Newborn (0-30 days old)	Not Specified	Premature neonates	23210743	details
Feces	Detected but not Quantified	Not Quantified	Newborn (0-30 days old)	Not Specified	Premature neonates	23210743	details

Predicted Concentrations

Biospecimen	Value	Original age	Original sex	Original condition	Comments
Blood	0.000 +/- 0.000 uM	Adult (>18 years old)	Both	Normal (Most Probable)	Calculated using MetaboAnalyst
Blood	0.633 +/- 0.603 uM	Adult (>18 years old)	Both	Normal (Upper Limit)	Calculated using MetaboAnalyst

Associated Disorders and Diseases

Disease References

Pregnancy
Bahado-Singh RO, Ertl R, Mandal R, Bjorndahl TC, Syngelaki A, Han B, Dong E, Liu PB, Alpay-Savasan Z, Wishart DS, Nicolaides KH: Metabolomic prediction of fetal congenital heart defect in the first trimester. Am J Obstet Gynecol. 2014 Sep;211(3):240.e1-240.e14. doi: 10.1016/j.ajog.2014.03.056. Epub 2014 Apr 1. [PubMed:24704061 ]
Obesity
Simone Wahl, Christina Holzapfel, Zhonghao Yu, Michaela Breier, Ivan Kondofersky, Christiane Fuchs, Paula Singmann, Cornelia Prehn, Jerzy Adamski, Harald Grallert, Thomas Illig, Rui Wang-Sattler, Thomas Reinehr (2013). Metabolomics reveals determinants of weight loss during lifestyle intervention in obese children. Metabolomics.

Associated OMIM IDs

601665 (Obesity)

External Links

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

131801675

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

VMH ID

Not Available

MarkerDB ID

Not Available

Good Scents ID

Not Available

References

Synthesis Reference

Not Available

Material Safety Data Sheet (MSDS)

Not Available

General References

Not Available

Only showing the first 10 proteins. There are 72 proteins in total.

Show all enzymes and transporters

Enzymes

Enzyme Details

1. Calcium-dependent phospholipase A2

General function:: Involved in phospholipase A2 activity
Specific function:: PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. This isozyme hydrolyzes more efficiently L-alpha-1-palmitoyl-2-oleoyl phosphatidylcholine than L-alpha-1-palmitoyl-2-arachidonyl phosphatidylcholine, L-alpha-1-palmitoyl-2-arachidonyl phosphatidylethanolamine, or L-alpha-1-stearoyl-2-arachidonyl phosphatidylinositol. May be involved in the production of lung surfactant, the remodeling or regulation of cardiac muscle.
Gene Name:: PLA2G5
Uniprot ID:: P39877
Molecular weight:: 15674.065

Enzyme Details

2. Group IIF secretory phospholipase A2

General function:: Involved in phospholipase A2 activity
Specific function:: PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Hydrolyzes phosphatidylglycerol versus phosphatidylcholine with a 15-fold preference.
Gene Name:: PLA2G2F
Uniprot ID:: Q9BZM2
Molecular weight:: 23256.29

Enzyme Details

3. Cytosolic phospholipase A2

General function:: Involved in metabolic process
Specific function:: Selectively hydrolyzes arachidonyl phospholipids in the sn-2 position releasing arachidonic acid. Together with its lysophospholipid activity, it is implicated in the initiation of the inflammatory response.
Gene Name:: PLA2G4A
Uniprot ID:: P47712
Molecular weight:: 85210.19

Enzyme Details

4. Phospholipase A2

General function:: Involved in phospholipase A2 activity
Specific function:: PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.
Gene Name:: PLA2G1B
Uniprot ID:: P04054
Molecular weight:: 16359.535

Enzyme Details

5. Group 10 secretory phospholipase A2

General function:: Involved in phospholipase A2 activity
Specific function:: PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Has a powerful potency for releasing arachidonic acid from cell membrane phospholipids. Prefers phosphatidylethanolamine and phosphatidylcholine liposomes to those of phosphatidylserine.
Gene Name:: PLA2G10
Uniprot ID:: O15496
Molecular weight:: 18153.04

Enzyme Details

6. Group IIE secretory phospholipase A2

General function:: Involved in phospholipase A2 activity
Specific function:: PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Has a preference for arachidonic-containing phospholipids.
Gene Name:: PLA2G2E
Uniprot ID:: Q9NZK7
Molecular weight:: 15988.525

Enzyme Details

7. Group XIIA secretory phospholipase A2

General function:: Involved in phospholipase A2 activity
Specific function:: PA2 catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides. Does not exhibit detectable activity toward sn-2-arachidonoyl- or linoleoyl-phosphatidylcholine or -phosphatidylethanolamine.
Gene Name:: PLA2G12A
Uniprot ID:: Q9BZM1
Molecular weight:: 21066.99

Enzyme Details

8. 85/88 kDa calcium-independent phospholipase A2

General function:: Involved in metabolic process
Specific function:: Catalyzes the release of fatty acids from phospholipids. It has been implicated in normal phospholipid remodeling, nitric oxide-induced or vasopressin-induced arachidonic acid release and in leukotriene and prostaglandin production. May participate in fas mediated apoptosis and in regulating transmembrane ion flux in glucose-stimulated B-cells. Has a role in cardiolipin (CL) deacylation. Required for both speed and directionality of monocyte MCP1/CCL2-induced chemotaxis through regulation of F-actin polymerization at the pseudopods. Isoform ankyrin-iPLA2-1 and isoform ankyrin-iPLA2-2, which lack the catalytic domain, are probably involved in the negative regulation of iPLA2 activity.
Gene Name:: PLA2G6
Uniprot ID:: O60733
Molecular weight:: 84092.635

Enzyme Details

9. Phosphatidylcholine-sterol acyltransferase

General function:: Involved in phosphatidylcholine-sterol O-acyltransferase activity
Specific function:: Central enzyme in the extracellular metabolism of plasma lipoproteins. Synthesized mainly in the liver and secreted into plasma where it converts cholesterol and phosphatidylcholines (lecithins) to cholesteryl esters and lysophosphatidylcholines on the surface of high and low density lipoproteins (HDLs and LDLs). The cholesterol ester is then transported back to the liver. Has a preference for plasma 16:0-18:2 or 18:O-18:2 phosphatidylcholines. Also produced in the brain by primary astrocytes, and esterifies free cholesterol on nascent APOE-containing lipoproteins secreted from glia and influences cerebral spinal fluid (CSF) APOE- and APOA1 levels. Together with APOE and the cholesterol transporter ABCA1, plays a key role in the maturation of glial-derived, nascent lipoproteins. Required for remodeling high-density lipoprotein particles into their spherical forms.
Gene Name:: LCAT
Uniprot ID:: P04180
Molecular weight:: 49577.545

Enzyme Details

10. Phospholipase A2, membrane associated

General function:: Involved in phospholipase A2 activity
Specific function:: Thought to participate in the regulation of the phospholipid metabolism in biomembranes including eicosanoid biosynthesis. Catalyzes the calcium-dependent hydrolysis of the 2-acyl groups in 3-sn-phosphoglycerides.
Gene Name:: PLA2G2A
Uniprot ID:: P14555
Molecular weight:: 16082.525

Transporters

Enzyme Details

1. Multidrug resistance protein 3

General function:: Involved in ATP binding
Specific function:: Mediates ATP-dependent export of organic anions and drugs from the cytoplasm. Hydrolyzes ATP with low efficiency. Human MDR3 is not capable of conferring drug resistance. Mediates the translocation of phosphatidylcholine across the canalicular membrane of the hepatocyte
Gene Name:: ABCB4
Uniprot ID:: P21439
Molecular weight:: 141521.8

Only showing the first 10 proteins. There are 72 proteins in total.

Show all enzymes and transporters

Showing metabocard for PC(P-18:1(11Z)/P-18:1(9Z)) (HMDB0011301)

MOL for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

3D MOL for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

3D SDF for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

3D-SDF for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

PDB for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

3D PDB for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

SMILES for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

INCHI for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

Structure for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

3D Structure for HMDB0011301 (PC(P-18:1(11Z)/P-18:1(9Z)))

Predicted Collision Cross Sections

Predicted Kovats Retention Indices

Underivatized

MS/MS Spectra

Enzymes

Transporters