Record Information |
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Version | 5.0 |
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Status | Detected and Quantified |
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Creation Date | 2005-11-16 15:48:42 UTC |
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Update Date | 2021-09-14 15:40:03 UTC |
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HMDB ID | HMDB0001548 |
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Secondary Accession Numbers | |
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Metabolite Identification |
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Common Name | D-Ribose 5-phosphate |
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Description | D-Ribose 5-phosphate (CAS: 4300-28-1), also known as R-5-P, belongs to the class of organic compounds known as pentose phosphates. These are carbohydrate derivatives containing a pentose substituted by one or more phosphate groups. D-Ribose 5-phosphate exists in all living species, ranging from bacteria to humans. Within humans, D-ribose 5-phosphate participates in a number of enzymatic reactions. In particular, D-ribose 5-phosphate can be biosynthesized from D-ribulose 5-phosphate; which is mediated by the enzyme ribose-5-phosphate isomerase. In addition, D-ribose 5-phosphate can be biosynthesized from D-ribose; which is catalyzed by the enzyme ribokinase. Outside of the human body, D-ribose 5-phosphate has been detected, but not quantified in cow milk and rices. D-Ribose 5-phosphate is both a product and an intermediate of the pentose phosphate pathway. The last step of the oxidative reactions in the pentose phosphate pathway is the production of ribulose 5-phosphate. D-Ribose 5-phosphate is an important intermediate metabolite in the pentose phosphate pathway and in the purine metabolism pathway. The intracellular ribose 5-phosphate concentration is an important determinant of the rate of de novo purine synthesis (PMID:6699001 ). |
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Structure | O[C@H]1O[C@H](COP(O)(O)=O)[C@@H](O)[C@H]1O InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4-,5+/m1/s1 |
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Synonyms | Value | Source |
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5-O-Phosphono-alpha-D-ribofuranose | ChEBI | alpha-D-Ribose 5-phosphate | ChEBI | 5-O-Phosphono-a-D-ribofuranose | Generator | 5-O-Phosphono-α-D-ribofuranose | Generator | a-D-Ribose 5-phosphate | Generator | a-D-Ribose 5-phosphoric acid | Generator | alpha-D-Ribose 5-phosphoric acid | Generator | Α-D-ribose 5-phosphate | Generator | Α-D-ribose 5-phosphoric acid | Generator | D-Ribose 5-phosphoric acid | Generator | D-Ribofuranose 5-phosphate | HMDB | R-5-p | HMDB | Ribose 5-(dihydrogen phosphate) | HMDB | Ribose 5-monophosphate | HMDB | Ribose 5-phosphate | HMDB | alpha-D-Ribose-5-phosphate | HMDB | Α-D-ribose-5-phosphate | HMDB | D-Ribose 5-phosphate | HMDB |
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Chemical Formula | C5H11O8P |
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Average Molecular Weight | 230.1098 |
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Monoisotopic Molecular Weight | 230.01915384 |
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IUPAC Name | {[(2R,3S,4R,5S)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acid |
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Traditional Name | α-D-ribose 5-phosphate |
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CAS Registry Number | 34980-65-9 |
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SMILES | O[C@H]1O[C@H](COP(O)(O)=O)[C@@H](O)[C@H]1O |
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InChI Identifier | InChI=1S/C5H11O8P/c6-3-2(1-12-14(9,10)11)13-5(8)4(3)7/h2-8H,1H2,(H2,9,10,11)/t2-,3-,4-,5+/m1/s1 |
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InChI Key | KTVPXOYAKDPRHY-AIHAYLRMSA-N |
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Chemical Taxonomy |
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Description | Belongs to the class of organic compounds known as pentose phosphates. These are carbohydrate derivatives containing a pentose substituted by one or more phosphate groups. |
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Kingdom | Organic compounds |
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Super Class | Organic oxygen compounds |
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Class | Organooxygen compounds |
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Sub Class | Carbohydrates and carbohydrate conjugates |
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Direct Parent | Pentose phosphates |
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Alternative Parents | |
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Substituents | - Pentose phosphate
- Pentose-5-phosphate
- Monosaccharide phosphate
- Monoalkyl phosphate
- Alkyl phosphate
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Tetrahydrofuran
- 1,2-diol
- Secondary alcohol
- Hemiacetal
- Polyol
- Oxacycle
- Organoheterocyclic compound
- Hydrocarbon derivative
- Organic oxide
- Alcohol
- Aliphatic heteromonocyclic compound
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Molecular Framework | Aliphatic heteromonocyclic compounds |
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External Descriptors | |
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Ontology |
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Not Available | Not Available |
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Physical Properties |
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State | Solid |
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Experimental Molecular Properties | Property | Value | Reference |
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Melting Point | Not Available | Not Available | Boiling Point | Not Available | Not Available | Water Solubility | Not Available | Not Available | LogP | Not Available | Not Available |
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Experimental Chromatographic Properties | Experimental Collision Cross Sections |
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Predicted Molecular Properties | |
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Predicted Chromatographic Properties | Predicted Collision Cross SectionsPredicted Kovats Retention IndicesUnderivatizedDerivatizedDerivative Name / Structure | SMILES | Kovats RI Value | Column Type | Reference |
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D-Ribose 5-phosphate,1TMS,isomer #1 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O)[C@@H](O)[C@H]1O | 2022.1 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,1TMS,isomer #2 | C[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O)O)O[C@H](O)[C@@H]1O | 2007.7 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,1TMS,isomer #3 | C[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O)O)[C@H]1O | 2032.9 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,1TMS,isomer #4 | C[Si](C)(C)OP(=O)(O)OC[C@H]1O[C@H](O)[C@H](O)[C@@H]1O | 2052.1 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TMS,isomer #1 | C[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O)O)O[C@H](O[Si](C)(C)C)[C@@H]1O | 2007.5 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TMS,isomer #2 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O)[C@@H](O)[C@H]1O[Si](C)(C)C | 2021.8 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TMS,isomer #3 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C)[C@@H](O)[C@H]1O | 2074.2 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TMS,isomer #4 | C[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O)O)[C@H]1O[Si](C)(C)C | 2019.2 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TMS,isomer #5 | C[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O)O[Si](C)(C)C)O[C@H](O)[C@@H]1O | 2066.5 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TMS,isomer #6 | C[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O)O[Si](C)(C)C)[C@H]1O | 2085.9 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TMS,isomer #7 | C[Si](C)(C)OP(=O)(OC[C@H]1O[C@H](O)[C@H](O)[C@@H]1O)O[Si](C)(C)C | 2057.6 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TMS,isomer #1 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O)[C@@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2015.2 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TMS,isomer #2 | C[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O)O[Si](C)(C)C)O[C@H](O[Si](C)(C)C)[C@@H]1O | 2059.2 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TMS,isomer #3 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C)[C@@H](O)[C@H]1O[Si](C)(C)C | 2074.3 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TMS,isomer #4 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@@H](O)[C@H]1O | 2052.9 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TMS,isomer #5 | C[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O)O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2091.3 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TMS,isomer #6 | C[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[C@H](O)[C@@H]1O | 2061.4 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TMS,isomer #7 | C[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@H]1O | 2110.9 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #1 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2062.9 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #1 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2043.7 | Standard non polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #1 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2391.5 | Standard polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #2 | C[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[C@H](O[Si](C)(C)C)[C@@H]1O | 2102.0 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #2 | C[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[C@H](O[Si](C)(C)C)[C@@H]1O | 2069.9 | Standard non polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #2 | C[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)O[C@H](O[Si](C)(C)C)[C@@H]1O | 2250.7 | Standard polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #3 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@@H](O)[C@H]1O[Si](C)(C)C | 2110.2 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #3 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@@H](O)[C@H]1O[Si](C)(C)C | 2077.3 | Standard non polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #3 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@@H](O)[C@H]1O[Si](C)(C)C | 2278.2 | Standard polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #4 | C[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2130.2 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #4 | C[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2072.1 | Standard non polar | 33892256 | D-Ribose 5-phosphate,4TMS,isomer #4 | C[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2251.0 | Standard polar | 33892256 | D-Ribose 5-phosphate,5TMS,isomer #1 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2107.4 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,5TMS,isomer #1 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2074.5 | Standard non polar | 33892256 | D-Ribose 5-phosphate,5TMS,isomer #1 | C[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C)O[Si](C)(C)C)[C@@H](O[Si](C)(C)C)[C@H]1O[Si](C)(C)C | 2188.1 | Standard polar | 33892256 | D-Ribose 5-phosphate,1TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O)[C@@H](O)[C@H]1O | 2259.5 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,1TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O)O)O[C@H](O)[C@@H]1O | 2263.7 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,1TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O)O)[C@H]1O | 2289.1 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,1TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)OP(=O)(O)OC[C@H]1O[C@H](O)[C@H](O)[C@@H]1O | 2281.6 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O)O)O[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O | 2413.7 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O)[C@@H](O)[C@H]1O[Si](C)(C)C(C)(C)C | 2424.2 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)[C@@H](O)[C@H]1O | 2503.3 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O)O)[C@H]1O[Si](C)(C)C(C)(C)C | 2452.9 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TBDMS,isomer #5 | CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[C@H](O)[C@@H]1O | 2503.7 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TBDMS,isomer #6 | CC(C)(C)[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)[C@H]1O | 2522.9 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,2TBDMS,isomer #7 | CC(C)(C)[Si](C)(C)OP(=O)(OC[C@H]1O[C@H](O)[C@H](O)[C@@H]1O)O[Si](C)(C)C(C)(C)C | 2497.0 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2636.3 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)O[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O | 2692.6 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)[C@@H](O)[C@H]1O[Si](C)(C)C(C)(C)C | 2709.1 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@@H](O)[C@H]1O | 2716.9 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TBDMS,isomer #5 | CC(C)(C)[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2726.7 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TBDMS,isomer #6 | CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[C@H](O)[C@@H]1O | 2711.8 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,3TBDMS,isomer #7 | CC(C)(C)[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@H]1O | 2736.6 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2910.5 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2776.2 | Standard non polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O)O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2768.6 | Standard polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O | 2918.0 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O | 2756.9 | Standard non polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #2 | CC(C)(C)[Si](C)(C)O[C@@H]1[C@@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)O[C@H](O[Si](C)(C)C(C)(C)C)[C@@H]1O | 2661.7 | Standard polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@@H](O)[C@H]1O[Si](C)(C)C(C)(C)C | 2931.5 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@@H](O)[C@H]1O[Si](C)(C)C(C)(C)C | 2760.8 | Standard non polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #3 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@@H](O)[C@H]1O[Si](C)(C)C(C)(C)C | 2685.8 | Standard polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2939.6 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2775.9 | Standard non polar | 33892256 | D-Ribose 5-phosphate,4TBDMS,isomer #4 | CC(C)(C)[Si](C)(C)O[C@H]1[C@@H](O)O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2660.6 | Standard polar | 33892256 | D-Ribose 5-phosphate,5TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 3145.7 | Semi standard non polar | 33892256 | D-Ribose 5-phosphate,5TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2902.7 | Standard non polar | 33892256 | D-Ribose 5-phosphate,5TBDMS,isomer #1 | CC(C)(C)[Si](C)(C)O[C@H]1O[C@H](COP(=O)(O[Si](C)(C)C(C)(C)C)O[Si](C)(C)C(C)(C)C)[C@@H](O[Si](C)(C)C(C)(C)C)[C@H]1O[Si](C)(C)C(C)(C)C | 2695.0 | Standard polar | 33892256 |
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| GC-MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Experimental GC-MS | GC-MS Spectrum - D-Ribose 5-phosphate GC-EI-TOF (Pegasus III TOF-MS system, Leco; GC 6890, Agilent Technologies) (5 TMS) | splash10-014j-1942000000-8c3468eabd202324a3ae | 2020-03-06 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - D-Ribose 5-phosphate GC-EI-TOF (Pegasus III TOF-MS system, Leco; GC 6890, Agilent Technologies) (5 TMS) | splash10-0fr2-1943000000-b5d1468f33c224a23bd3 | 2020-03-06 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - D-Ribose 5-phosphate GC-EI-TOF (Pegasus III TOF-MS system, Leco; GC 6890, Agilent Technologies) (5 TMS; 1 MEOX) | splash10-00di-9532000000-693524b08b2ccd6179c5 | 2020-03-06 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - D-Ribose 5-phosphate GC-EI-TOF (Pegasus III TOF-MS system, Leco; GC 6890, Agilent Technologies) (5 TMS; 1 MEOX) | splash10-00di-9421000000-dbcd94d0a73f35716059 | 2020-03-06 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - D-Ribose 5-phosphate GC-EI-TOF (Non-derivatized) | splash10-014j-1942000000-8c3468eabd202324a3ae | 2020-03-06 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - D-Ribose 5-phosphate GC-EI-TOF (Non-derivatized) | splash10-0fr2-1943000000-b5d1468f33c224a23bd3 | 2020-03-06 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - D-Ribose 5-phosphate GC-EI-TOF (Non-derivatized) | splash10-00di-9532000000-693524b08b2ccd6179c5 | 2020-03-06 | HMDB team, MONA, MassBank | View Spectrum | Experimental GC-MS | GC-MS Spectrum - D-Ribose 5-phosphate GC-EI-TOF (Non-derivatized) | splash10-00di-9421000000-dbcd94d0a73f35716059 | 2020-03-06 | HMDB team, MONA, MassBank | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - D-Ribose 5-phosphate GC-MS (Non-derivatized) - 70eV, Positive | splash10-0002-9320000000-9b5fdcbd0e9ea3ece549 | 2016-09-22 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - D-Ribose 5-phosphate GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum | Predicted GC-MS | Predicted GC-MS Spectrum - D-Ribose 5-phosphate GC-MS (Non-derivatized) - 70eV, Positive | Not Available | 2021-10-12 | Wishart Lab | View Spectrum |
MS/MS SpectraSpectrum Type | Description | Splash Key | Deposition Date | Source | View |
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Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate Quattro_QQQ 10V, Positive-QTOF (Annotated) | splash10-0002-9320000000-7f3d980d223a6b9f5f3f | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate Quattro_QQQ 25V, Positive-QTOF (Annotated) | splash10-0002-9000000000-a5df0614f5cbd8b55405 | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate LC-ESI-ITFT (LTQ Orbitrap XL, Thermo Scientfic) , Negative-QTOF | splash10-056r-0090700000-ea86961dacc666b5fc7d | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate LC-ESI-ITFT (LTQ Orbitrap XL, Thermo Scientfic) , Negative-QTOF | splash10-0002-9100000000-6cbb3e84820a37a47fbb | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate LC-ESI-ITFT (LTQ Orbitrap XL, Thermo Scientfic) , Negative-QTOF | splash10-004i-0090000000-10949588537786dbae1e | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate LC-ESI-ITFT (LTQ Orbitrap XL, Thermo Scientfic) , Negative-QTOF | splash10-0a4i-0000900000-10d8b4fd09ed514cc12e | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate LC-ESI-QTOF (UPLC Q-Tof Premier, Waters) , Negative-QTOF | splash10-002b-9000000000-49264a7584727750bd70 | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate LC-ESI-ITFT , negative-QTOF | splash10-0002-9100000000-6cbb3e84820a37a47fbb | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate LC-ESI-ITFT , negative-QTOF | splash10-004i-0090000000-10949588537786dbae1e | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate LC-ESI-ITFT , negative-QTOF | splash10-0a4i-0000900000-10d8b4fd09ed514cc12e | 2020-03-06 | HMDB team, MONA | View Spectrum | Experimental LC-MS/MS | LC-MS/MS Spectrum - D-Ribose 5-phosphate LC-ESI-QTOF , negative-QTOF | splash10-002b-9000000000-340deaecb0169ce2acd3 | 2020-03-06 | HMDB team, MONA | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 10V, Positive-QTOF | splash10-001i-1790000000-a3ced14cd6c2537c6d8f | 2016-09-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 20V, Positive-QTOF | splash10-001i-5940000000-8bcb763477232ce1dd2c | 2016-09-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 40V, Positive-QTOF | splash10-00y1-9300000000-ff5bd2489969fca00eb7 | 2016-09-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 10V, Negative-QTOF | splash10-004i-7190000000-184075252146923d2684 | 2016-09-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 20V, Negative-QTOF | splash10-004i-9000000000-917b1eb059131caa49ac | 2016-09-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 40V, Negative-QTOF | splash10-004i-9000000000-579393c266ea056c9e74 | 2016-09-12 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 10V, Positive-QTOF | splash10-0159-1900000000-c7b876b70c54c880bdf3 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 20V, Positive-QTOF | splash10-01c1-9600000000-649e860a529bc7f5b4f8 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 40V, Positive-QTOF | splash10-053s-9000000000-f9d938955d2446665511 | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 10V, Negative-QTOF | splash10-004j-9040000000-9ee7ba6767ffa3f356db | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 20V, Negative-QTOF | splash10-004i-9000000000-a5e502a2627af2048a1f | 2021-09-22 | Wishart Lab | View Spectrum | Predicted LC-MS/MS | Predicted LC-MS/MS Spectrum - D-Ribose 5-phosphate 40V, Negative-QTOF | splash10-004i-9000000000-a5e502a2627af2048a1f | 2021-09-22 | Wishart Lab | View Spectrum |
NMR SpectraSpectrum Type | Description | Deposition Date | Source | View |
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Experimental 1D NMR | 1H NMR Spectrum (1D, 500 MHz, H2O, experimental) | 2020-03-06 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 100 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 200 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 300 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 400 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 500 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 600 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 700 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 800 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 900 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 13C NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Predicted 1D NMR | 1H NMR Spectrum (1D, 1000 MHz, D2O, predicted) | 2021-09-16 | Wishart Lab | View Spectrum | Experimental 2D NMR | [1H, 13C]-HSQC NMR Spectrum (2D, 600 MHz, H2O, experimental) | 2020-03-06 | Wishart Lab | View Spectrum |
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Disease References | Ulcerative colitis |
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- Kolho KL, Pessia A, Jaakkola T, de Vos WM, Velagapudi V: Faecal and Serum Metabolomics in Paediatric Inflammatory Bowel Disease. J Crohns Colitis. 2017 Mar 1;11(3):321-334. doi: 10.1093/ecco-jcc/jjw158. [PubMed:27609529 ]
| Crohn's disease |
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- Kolho KL, Pessia A, Jaakkola T, de Vos WM, Velagapudi V: Faecal and Serum Metabolomics in Paediatric Inflammatory Bowel Disease. J Crohns Colitis. 2017 Mar 1;11(3):321-334. doi: 10.1093/ecco-jcc/jjw158. [PubMed:27609529 ]
| Alzheimer's disease |
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- Tsuruoka M, Hara J, Hirayama A, Sugimoto M, Soga T, Shankle WR, Tomita M: Capillary electrophoresis-mass spectrometry-based metabolome analysis of serum and saliva from neurodegenerative dementia patients. Electrophoresis. 2013 Oct;34(19):2865-72. doi: 10.1002/elps.201300019. Epub 2013 Sep 6. [PubMed:23857558 ]
| Frontotemporal dementia |
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- Tsuruoka M, Hara J, Hirayama A, Sugimoto M, Soga T, Shankle WR, Tomita M: Capillary electrophoresis-mass spectrometry-based metabolome analysis of serum and saliva from neurodegenerative dementia patients. Electrophoresis. 2013 Oct;34(19):2865-72. doi: 10.1002/elps.201300019. Epub 2013 Sep 6. [PubMed:23857558 ]
| Lewy body disease |
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- Tsuruoka M, Hara J, Hirayama A, Sugimoto M, Soga T, Shankle WR, Tomita M: Capillary electrophoresis-mass spectrometry-based metabolome analysis of serum and saliva from neurodegenerative dementia patients. Electrophoresis. 2013 Oct;34(19):2865-72. doi: 10.1002/elps.201300019. Epub 2013 Sep 6. [PubMed:23857558 ]
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